Synechococcus sp. NB0720_010: LY254_05880
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Entry
LY254_05880 CDS
T10498
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
syno Synechococcus sp. NB0720_010
Pathway
syno03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
syno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LY254_05880 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syno03400
]
LY254_05880 (xseA)
Enzymes [BR:
syno01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
LY254_05880 (xseA)
DNA repair and recombination proteins [BR:
syno03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
LY254_05880 (xseA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
UPH91199
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Position
1112720..1113871
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AA seq
383 aa
AA seq
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MKSDSGIPRYSVAELNQAIGSLLERGFAPRFLLEATVSRPQLKKGHLWLTLVDKSASISG
VVWSSQRERLSYQPSEGDGVLVVGKLNFWASRANLCVQILDIRPALSAVLRQFERVCALL
EPEGLLAAERKRPLPEMPAAIALLTSVPSSALADMLRTAQERWPATTVHVVPIPVQGMVA
ATIRKRLAEVLERSDELQIEAIVLARGGGAREDLAVFDDEELARDLAASPIPVVTGLGHE
DDTTVADLVADYRAATPTAAVVALLPDRESLSQGLQHRLAIVRQLMLHRLQQGQQRLALQ
RQRLEQCHPSLIIERERERLQQRLQLLEALSPQRLLRRGFSLVRRADGSLLRSVSQSQAG
DSLRLELIDGKIEAVVEQVSPHP
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgaagagcgactccggcatcccgcgttacagcgtcgcggaactcaatcaagccattggc
tcgctgctggagcggggctttgcaccccggtttctgctggaggccaccgtttcgcggccc
caactgaaaaaagggcatctgtggctgaccctggtggataagtcggcctccatctccggt
gtggtctggtcctcccagcgggagcgcctgagctaccagcccagcgaaggggatggggtc
ctggtggtggggaaactgaacttctgggccagccgcgccaacctctgcgttcagatcctc
gacatccgtccagccctcagcgcggttctacggcagttcgagcgggtctgcgcgctcctg
gaacccgagggcctcttggccgcggagcgcaaacgccccctgccggagatgcccgcagcg
attgccctcttaaccagcgttcccagttccgccctggcggacatgctgcgcacagcccag
gagcgctggccggcgaccacggttcacgtggtgccgattcccgtgcaggggatggtggcc
gcaaccatccgcaagcgcctggccgaggtgctcgagcgcagcgacgaactgcagatcgag
gccatcgttctggcccgcgggggcggcgctcgagaggacctggccgtcttcgacgacgag
gagctggcccgcgacctggcggcgagcccgatcccggtggtcactggcctagggcacgag
gacgacacgaccgtggccgaccttgtggcggactaccgcgcggcgacgccgaccgcggcc
gtcgttgcgcttctgccggatcgcgagtccctctcgcaggggctccagcaccgcctggcc
atcgtccgtcaactgatgctgcatcgcctccaacagggacagcagcgactcgcgctgcag
cgccagcggctggagcaatgccaccccagcctgatcatcgagcgggagcgcgagcgactg
cagcaacggctgcaactgctggaagccctgtcgccgcaaaggctgctcagacgcggcttc
tccttggtgcgcagggccgatggctccctgctgcgctccgtcagccagagccaggcgggc
gattccctcaggctggagctaatcgacggcaagatcgaggccgtggtggagcaggtcagc
cctcacccctga
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