Synechococcus sp. NB0720_010: LY254_06730
Help
Entry
LY254_06730 CDS
T10498
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
syno Synechococcus sp. NB0720_010
Pathway
syno03018
RNA degradation
Brite
Enzymes [BR:
syno01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
LY254_06730
Messenger RNA biogenesis [BR:
syno03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LY254_06730
Ribosome biogenesis [BR:
syno03009
]
Prokaryotic type
rRNA processing factors
LY254_06730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
UPH89015
LinkDB
All DBs
Position
complement(1253726..1255765)
Genome browser
AA seq
679 aa
AA seq
DB search
MPQQIVIAEQLRIAAVLTDERVDELVVAQGRYQIGDVYLGTIENVLPGIDAAFVNIGEGE
KNGFIHVTDLGPLRLKKGTVGITELLEPRQKVLVQVMKEPTGTKGPRLTGNLTLPGRFLV
LQPHGQGVNISRRITAESERNRLRALGVLIKPPGAGLLIRTEAEGISEEQLIDDLEALLR
QWEAIQTAAEAATPPVLLNRDDDFIHRILRDHYTPELARIVVDAPDAVARVNTFLGSDHQ
QVLVEHHSEPTEILEHYKVNAAIRDALKPRVDLPSGGYVIIEPTEALTVIDVNSGSFTRS
ANARETVLWTNYEAATEIARQLKLRNIGGVVIIDFIDMESRRDQLQLLEHFTSEVRSDSA
RPQIAQISELGLVELTRKRQGQNIYELFGRACPSCGGLGHVVVLPGQDTLQPLASVSGLV
RSAASARAEASTPAALESGSGGRRRGRGRGGRGSEGEVVAAYEDSASLATGQAESSAAAS
SEGHNRRPEPELVAVPMEPEQELVYGWLGLNPALLLDPAPNPDNLLVRVVRPGQDAEAVL
EEARQQLAAAGPRRRRRGRGGSTANSNGHGATPAPVAVAQAEPTGVAITPLPTVSITEVA
ITEAPLPAVAIVDSAASPAPADEAPARAGRTRTRTRSSAVAVTEEAPVAAASVVAVPVVE
EVDDNGEPRRRRRRSSASD
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgccccagcagatcgtcatcgccgagcaactgcggattgccgctgttctcaccgatgag
cgtgttgacgagcttgtcgtcgcacagggtcgctaccaaatcggcgacgtgtatctcggg
acgatcgagaacgtcctgcccggcattgacgcggccttcgtcaacatcggagagggcgag
aagaacggctttattcatgtcaccgacctcggtccccttcgcctgaagaagggcaccgtt
ggcatcacggaattgctcgagccccgccagaaggtgctggttcaggtgatgaaggagccc
acgggcaccaaagggccccgtctgaccggaaatctcaccctgccgggtcgtttcttggtg
ctgcagccccacggccaaggggtcaatatttcgcgccggatcactgctgagagtgagcgc
aatcgcctccgtgcccttggcgtcctgatcaagccccctggggctggtctgctgatccga
accgaagcggagggcatcagcgaagagcagctcattgacgatcttgaggcgctgctgcgc
cagtgggaggccattcagacggccgctgaggcagcgacgcccccggtgctgctcaaccgg
gatgacgacttcatccatcgcatcctgcgcgatcactacacccctgagctggcgcggatc
gtggtggacgcgcccgacgcggtcgcccgggtcaacaccttcttgggtagtgaccatcag
caggtgctggtggagcatcacagcgagcccaccgaaatccttgagcactacaaggtcaat
gcggcgattcgcgatgccctgaagccccgggtggatctgccctcgggcggttacgtgatc
atcgagccgaccgaggccctgaccgtcattgacgtcaactcgggttccttcacccgctcg
gccaatgcccgcgagacggtgctctggaccaactatgaggcggcgacagaaattgcgcgc
caactgaagctgcgcaacatcggtggtgtcgtgatcatcgacttcatcgatatggagtcc
aggcgcgatcagctccagctactggagcacttcacctctgaggtgcgctccgattcggcc
cgtccccagatcgcccagatcagcgaactgggcctggtggaactcacccgcaagcgccag
gggcagaacatttatgagctgtttggccgggcctgccccagttgcggcggtctgggtcat
gtggtggtgctgcctggacaggacaccctccagcccctggccagcgtctccggcttggtt
cgctcggccgcctcggcccgtgctgaagcctcaaccccggcggcactggagagcggtagt
ggtggccgccgccgcggacgtggtcgcggtggccgcggctccgagggcgaggtggtggcg
gcctacgaggacagcgcctcgctggccaccggccaggctgagagttctgctgccgccagc
tcggaaggccataaccgccggcctgagcctgaattggtcgctgtgccgatggagcctgag
caggagttggtctacggctggttgggtctgaacccagccctgctcttggatcccgccccc
aatcccgacaacctgttggtgcgggtggtgcgtccaggtcaagacgccgaggcggtcctc
gaggaggcccgtcagcagttggccgccgccggtccccgccgccgccgccgcggtcgcggc
ggaagtactgccaacagcaacggccatggcgcgacacccgctccggtggctgtcgcccag
gccgaacccacgggtgtggcgatcacacccctgccgacggtctcgattacagaagtggcg
atcactgaggccccactgccggcggtggcgatcgttgattccgcggcttcacccgctccc
gcagacgaggctccggcccgcgctggccgcactcggacgcgcacccgcagcagtgcggtt
gcggtcaccgaagaggcccctgttgctgcagcctcggtggttgctgttcctgttgtggag
gaggtcgacgacaacggtgagccccgccgtcgccgccgccgttcctcggcgagcgactga
DBGET
integrated database retrieval system
