Synechococcus sp. NB0720_010: LY254_07670
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Entry
LY254_07670 CDS
T10498
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
syno Synechococcus sp. NB0720_010
Pathway
syno03420
Nucleotide excision repair
syno03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
syno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LY254_07670
03430 Mismatch repair
LY254_07670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syno03400
]
LY254_07670
Enzymes [BR:
syno01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LY254_07670
DNA repair and recombination proteins [BR:
syno03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LY254_07670
MMR (mismatch excision repair)
Other MMR factors
LY254_07670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
DEAD
Motif
Other DBs
NCBI-ProteinID:
UPH89186
LinkDB
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Position
complement(1447294..1449672)
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AA seq
792 aa
AA seq
DB search
MSFLAGLNDAQRKAVDHHEGPLLVVAGAGSGKTRALTHRIAHMIGQHGVDPAELLAVTFT
NKAAREMKERLELLLAQKLAQSQFGQPWSTLAAVDQRQLRSRIYREVIKDLWIGTFHALF
ARLLRFDIDKFRDPEGLTWTRQFSIYDEGDTQSLVKEIVTQELGLDPKRFEPKKVRWAIS
NAKNQGWMPEQLQADTGGQRGKLMAETYRRYRRALAANNALDFDDLLLLPVQLLRQNDQV
RNYWHRRFRHVLVDEYQDTNRTQYDLIKLLVTDGRDPESFDDWSGRSVFVVGDADQSIYS
FRAADFTILMGFQDDFGDGAPDEATQTMVKLEENYRSTATILEAANVLIANNSERIDKVL
RPTRGEGELLTLTRCDDEIAEAEAVVHRMRMMDAAHPDLSWGDMAVLYRTNAQSRAMEES
LVRWGIPYVVVGGLRFYDRREIKDMLAYLKLLVNPADTVSLLRVLNTPKRGIGKTTIERL
TDAANQLGIPLWDVVSDPEAVRSLGGRSAKGLLQFCELINNLKDRSQEAAPSELVQLAME
KSGYVAELIAAGTDEAEDRRRNLNELVNAALQYQEENEEGSLEDFLASAALASDADSKDT
EQDRVTLMTLHASKGLEFPVVFLVGMEQGLFPSYRSLEDPAAMEEERRLCYVGITRAKER
LFLSHASERRLWGGMREPAVPSVFLSELPEALVQGDIPRSGGAAIRREQRLDRLTRIDRP
GGGASPSQPANAVRRRAPARTWSVGDRVRHSSFGEGQVTHLFGSGEKTSLAVKFEGMGPK
ILDPRLAPIEPL
NT seq
2379 nt
NT seq
+upstream
nt +downstream
nt
atgagctttcttgcgggtctcaatgatgcccagcgcaaggccgtggaccatcatgaaggt
ccattgctggtggtggctggtgcggggagcggtaagacccgcgccttgacccatcgcatt
gcccacatgatcgggcagcacggcgtcgatccggctgagctgctggcggtcaccttcacc
aacaaggctgcgcgcgagatgaaggagcgactcgagctgctcctagcccagaagctggcc
cagagccaattcggacagccctggagcaccttggcggctgtcgatcagcggcaactgcgt
tcgcggatctatcgcgaggtgattaaggacctctggatcggtacgtttcacgccctcttt
gcgcgcttactgcgctttgacatcgataagttccgcgatccagaggggctcacgtggacc
cgtcagttctcgatctacgacgaaggggatacccaaagcctggtcaaagagatcgtcacc
caggagcttgggctcgatcccaaacgctttgagcccaagaaggttcgctgggccatcagc
aacgcaaagaaccagggttggatgcccgagcagctccaggccgacacgggcgggcagcgc
ggcaagttgatggctgagacctatcgccgctatcggcgtgctttagccgcgaataacgcc
ctggacttcgacgacctgctgttgctgccggtgcagttgctgcgtcagaacgaccaagtc
cgcaattattggcatcgccgctttcggcacgttctggtggatgaataccaggacaccaac
cgcacccagtacgacctgatcaaacttctggtcacggatggacgcgatccggaatccttt
gacgactggtctggccgctcggtgtttgttgtcggcgatgccgaccagagcatctacagc
ttccgcgctgcagacttcaccatcctgatgggctttcaggatgactttggcgatggtgcg
ccagatgaggccacgcagaccatggtcaagttggaggagaactatcgctctacagcaacc
attcttgaagcggcgaacgtcctgattgcgaacaacagtgagcggatcgacaaggtccta
aggccgacgcgtggtgaaggtgaactgctgacgttgacccgctgcgatgacgagattgct
gaagccgaagcggtggttcaccgcatgcgaatgatggatgcggcccatcccgacttgagc
tggggagatatggctgtgctgtatcgcaccaatgctcagtcccgtgcgatggaggaatcc
ctggtgcgctggggcattccctatgtggttgtcggtggcttgcgcttctatgaccgccgc
gagatcaaagacatgctcgcgtatctcaaattgttggtgaatcctgccgacacggtgagt
ttgttgcgggtcttgaatacacccaagcgtggtatcggtaagaccacgattgaacggctg
acggatgctgccaatcaacttgggattccgctttgggatgtcgtcagcgatcccgaggcc
gtgcgctccctcggaggtcgttcggcgaaaggattgcttcagttctgtgagttgatcaac
aacctgaaggatcgctcccaagaggcagccccctctgagttggttcagctggcgatggag
aaaagcggttatgtcgctgagctgatcgctgcggggacggatgaggcagaggaccggcgc
cgcaaccttaacgaactggtcaatgccgcactgcagtaccaggaggaaaacgaagagggc
tccctggaagacttcctggcctcagccgctttggcgagcgatgccgacagcaaggacacc
gagcaggaccgggtgactttgatgaccctgcacgccagcaagggtctggagtttccggtg
gtgtttttggtcggaatggagcagggtctcttccccagctatcgatccttggaagatcca
gcagctatggaggaagagcggcgcctctgttacgtcggcattacgcgggccaaagagcgc
ctcttcttgtcccatgccagcgagcgacgtctctggggcggcatgcgcgagccggctgtc
ccgtcggttttcctctcagaactaccggaggccttggttcaaggcgacatcccccgcagc
ggtggtgctgcaattcgccgggaacagcgactcgatcggcttacccgaattgatcgaccg
ggtggcggagcttccccatcacaacccgcgaacgccgtgcgccggcgtgcccccgcgcga
acctggtctgtgggcgatcgggtgcgtcacagctccttcggagaaggccaggtcacccac
ctcttcggcagcggtgaaaagacctctcttgctgtgaagtttgagggcatggggcccaag
atcctggacccccgcttggctccgatcgagccgctctga
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