Synechococcus sp. NB0720_010: LY254_07885
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Entry
LY254_07885 CDS
T10498
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
syno Synechococcus sp. NB0720_010
Pathway
syno03030
DNA replication
syno03430
Mismatch repair
syno03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
syno00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LY254_07885 (holA)
03430 Mismatch repair
LY254_07885 (holA)
03440 Homologous recombination
LY254_07885 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
syno03032
]
LY254_07885 (holA)
03400 DNA repair and recombination proteins [BR:
syno03400
]
LY254_07885 (holA)
Enzymes [BR:
syno01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LY254_07885 (holA)
DNA replication proteins [BR:
syno03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LY254_07885 (holA)
DNA repair and recombination proteins [BR:
syno03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LY254_07885 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
HP_1247_M
Motif
Other DBs
NCBI-ProteinID:
UPH89222
LinkDB
All DBs
Position
complement(1498855..1499835)
Genome browser
AA seq
326 aa
AA seq
DB search
MPIHLIWGDDEAARSRAVEALVKNQVDPAWQSINLSRLDGNDANQAAQALEEARTAPFGG
GDRVIVLQRSPFCNQCPADLAEQLETSLNLVAEQCHLVLVNAAKPDGRLKTTKALQKLVK
SGEAQERSFQLPAIWDGSGQVELVQRTAQELGLKLQPDAAQALSDAIGSDSARLASELEK
LSLYAGAGQAITAQAVDALIGSQATNALQVGDALLAGQPAAAVALVDVLLAANEPALRIV
ATLCGQIRGWLWVSLLDQQGENDVNAIAKAAGIGNPKRIYVMRKQIRGRKPERFLALLSQ
LLQVEANLKRGADPGDAFRDGFLLTP
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgccgatccatctgatctggggcgacgacgaagccgcgcgcagcagggccgtcgaagca
ctggtcaagaaccaggtcgatcccgcttggcagagcatcaacctcagccgtctggacggc
aacgatgccaatcaggccgctcaagccctggaggaagcgcgaacagcccccttcggcggc
ggcgatcgggtgatcgtgttgcagcgcagccccttctgcaatcagtgcccggctgacctg
gccgaacagctggagaccagcctcaatctggtggcggagcagtgccatctggtgttggtc
aacgccgccaaaccggatgggcggctcaagaccaccaaggccctgcaaaaactggtcaaa
agcggtgaagcccaggagcgcagcttccaactgccggcgatctgggatggatcagggcaa
gtggagttggtgcaacgcacagcccaggagctgggcctgaaactgcagccagacgccgcc
caagcgctgagcgatgccatcggtagcgacagcgccaggctggcgagcgaactggaaaaa
ctctccctctacgccggagcaggccaggccatcacagcccaagccgtggacgccctgatc
ggcagccaggccaccaatgccctccaggtgggtgatgccctgctggctggacaacctgca
gcagccgtggcgctggtggatgtgctgctggccgccaatgagcccgccctacggatcgtg
gccacgctctgcgggcaaatccgcggttggctttgggtgagcctgctggatcagcagggc
gagaacgatgtcaatgccatcgctaaagccgccggcattggcaatcccaagcggatctac
gtgatgcgcaaacagatccgcggccgcaaacccgaacgcttcctcgctctactcagtcag
ctcctgcaggtggaggccaacctcaagcgcggcgctgaccccggtgatgccttccgcgac
gggttcctactgacgccatag
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