Synechococcus sp. NB0720_010: LY254_07925
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Entry
LY254_07925 CDS
T10498
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
syno Synechococcus sp. NB0720_010
Pathway
syno00521
Streptomycin biosynthesis
syno00523
Polyketide sugar unit biosynthesis
syno00541
Biosynthesis of various nucleotide sugars
syno01100
Metabolic pathways
syno01110
Biosynthesis of secondary metabolites
syno01250
Biosynthesis of nucleotide sugars
Module
syno_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
syno00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LY254_07925 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LY254_07925 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LY254_07925 (rfbC)
Enzymes [BR:
syno01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
LY254_07925 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
UPH89229
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Position
1506088..1506678
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AA seq
196 aa
AA seq
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MQAERLATAAGVQLSGPLLITPRVFGDARGFFYESWNQLSFNAVLEADGQSPADFVQDNH
SRSSQGVLRGLHFQKDPHGQGKLVRCIQGEIFDVAVDCRQSSPTFGQWVSARLSSENQQQ
LWVPVGFAHGFLTMSSQVEVLYKTTDFWDRESERSLLWSDPDLAIAWPQSTAPLLAEKDA
AAPSWQVLIAAGDGFQ
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atgcaggctgagcgcctagcgacggcggccggagtgcagctgtccggccctctgttgatc
accccccgggtgttcggcgatgcccgtggcttcttctacgaaagctggaaccagctcagc
ttcaacgctgttctggaggcggatgggcagtcacccgctgactttgttcaagacaaccac
tcccgctccagtcagggggttcttcgcgggctgcactttcaaaaggacccccatggccaa
gggaagttggtgcgctgcatccagggcgagatcttcgatgtggccgtggattgccgccag
tcttcccccacgtttggccagtgggttagcgctcgcctgagcagcgagaaccaacagcag
ctctgggtgccggtgggctttgcccatggctttttgaccatgagctcccaggtggaggtg
ctctacaagacaaccgatttctgggatcgagagagcgagcgctccctgctctggagtgac
cctgatctcgccattgcctggccccaatccaccgcgccacttttggcggagaaagacgcg
gcagcaccctcatggcaggtgctgatcgccgcaggggatggcttccagtga
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