Synechococcus sp. NB0720_010: LY254_09195
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Entry
LY254_09195 CDS
T10498
Name
(GenBank) DEAD/DEAH box helicase
Organism
syno Synechococcus sp. NB0720_010
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
DEAD
ResIII
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
UPH89461
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Position
complement(1750034..1753153)
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AA seq
1039 aa
AA seq
DB search
MSLLHATWLPVVPAGSFAKGKAPTAGLLIWADTWRVAEPLSPAAEAPFHPLSLDLDDLAT
WLDENNFWSEDLRQATVTLTLPSRQQLSKGQKSSESSAWSGLPLQSGEPLPKDLSWWPWQ
VEGWFLKPGPAAAWLNQLPLSGAYEAGLGDDLLWWCHVQRWCLSLIARGRWLPESADGKA
SWRPLLNREDDRRRLEELALRMPQVVAASSPDPQLACGRPRSNRLLVASIVDKLVDGQLR
EAFQPGAAGLDPLLSAWEDGLASRDGKLKLDEEEQERLCGASNHWRETVAGKVAPARACL
ELFTPPEGEELWELKFGLQAEADPSLRVPAGLVWAAGDSNLALGEIQLEQPGALLLEGLG
RALLAFEPLERGLDAATPEAMQLTPAEAFVLVRTAASRLRDVGVGVVLPASLSGGLASRL
GLAITAELPEKSRGFTLGETLEWRWEFMIGGVTLNLKDLEKLSAKRSPLVQHKGAWIELR
PLDLKNAEKFCSAEPPFSLDDALRITGNEGETLSRLPVHAFTAGPRLQAVLEQYHQQKAP
DPLPAPPGFAGQLRPYQERGLGWLAFLHRFDQGACLADDMGLGKTIQLLAFLQHLKAEEE
LKRPVLLVAPTSVLTNWKREAAAFTPDLTVNEHYGPRRPSSPEALKKALKGVDLVLTTYG
LLQRDSELLDKVDWQGVVIDEAQAIKNHAAKQSMAARDMGRPGKGPRFRIALTGTPVENR
VSELWALMDFLNPKVLGDEPFFRQRYRMPIERYGDMSSLRDLKGRVGPFILRRLKTDKSI
ISDLPEKVELSEWVGLAPEQKKLYSKTVDESLDAIARSPLGQKHGQVLALLTKLKQICNH
PALALKQDPADADASFFKEFAARSAKVQRLEEILEEVMEAGDRALLFTQFAEWGHLLKAH
LEHKWRQEVPFLYGSTSKTERQAMVDRFQDDPRGPQLFLLSLKAGGVGLNLTRASHVFHI
DRWWNPAVENQATDRAYRIGQQNRVMVHKFITSGSVEERIDRMIKEKSKLAEDIVGSGED
WLGGMDVSQLKELVTLSDD
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgctgcatgccacctggctgcccgtcgttccggcggggagcttcgccaaaggc
aaggcgcctacagccggcctgttgatctgggcggacacctggcgcgtggccgaaccgctc
agtccggcagctgaggcgccgttccaccccctcagcctggatctggacgatctggccacc
tggctggacgagaacaacttctggtccgaggacctgcgccaggccaccgtcaccctgacc
ctgccgagccggcagcaactgagcaaaggacaaaagagcagcgaatccagtgcctggagc
ggcctgccgctgcaatcaggagaaccgctgccgaaggatctgagctggtggccctggcaa
gtcgagggctggttcctcaaaccgggccccgctgccgcctggctcaatcaactgcccctc
tcgggggcctacgaggccggactgggtgatgacctgctctggtggtgccacgtccagcgc
tggtgcctcagcctgatcgcccggggccgctggctacccgagagcgcggatggcaaggcc
agctggcgcccgctgctgaaccgtgaggacgaccgccgccggctcgaggagctggccttg
cgcatgccccaggtggtggcggcctccagcccagatccccagttggcctgcggccgcccc
cgctccaaccggctgctggtggcgagcatcgtcgacaagctggtggacggccagctacgc
gaagccttccaacccggtgcagccggcctcgatccactgctgtctgcctgggaagacggc
ctggccagccgcgacggcaagctcaaactcgatgaagaggagcaagagcgcctctgcggc
gcaagcaaccactggcgcgagaccgtcgccggcaaggtggctcccgcccgggcctgcctg
gagctgttcacgccgccggaaggggaggaactctgggaactgaaattcggcctccaggcg
gaagccgaccccagcctgcgggtgcccgctggactggtctgggccgcaggggacagcaac
ctggccctgggtgagatccaactggagcagcccggagcgctcctgctggagggtctgggc
cgcgccctcttggcctttgagcctcttgagcggggcctggatgccgccacccctgaggcg
atgcagctcacccccgcggaggccttcgtcctggtgcggaccgccgcttcccgcctgcgg
gatgtgggcgtcggggtggtgctccccgcgagcctctccggtggcctggccagccgcctg
ggcctggccatcaccgccgagctgcccgagaagtcccgcggcttcactctcggggaaacc
ctggagtggcgctgggaattcatgatcggcggggtcacgttgaacctgaaggacctcgag
aagctctcggccaagcgcagcccgctggtgcagcacaagggggcctggatcgaactgcgg
cccctggacctcaagaacgccgagaagttctgctccgctgagccccccttcagcctcgat
gacgccctgcggatcacgggcaatgaaggggagaccctctcccgcttgccggtccatgcc
ttcacggccgggccccgcctgcaggcggtgctggagcagtaccaccagcagaaagccccc
gatcccctgccagcgccccctgggttcgccggacaactgcggccctatcaggagcgcggt
ctgggctggctggccttcctgcatcgcttcgatcagggcgcctgcctggccgatgacatg
ggtctgggtaaaacgatccaactcttggccttcctgcagcacctcaaggctgaagaggag
ctcaaacgcccggtgctcctggtcgctcccacctcggtgctgaccaactggaagcgggaa
gccgccgccttcaccccagatctgacggtcaacgagcactacggaccccgccgcccctcc
agccccgaggccctgaaaaaagcgctgaagggtgtggacctggtgctgaccacctacggc
ctgctgcagcgggacagcgaactgctggacaaggtcgattggcagggggtcgtgatcgat
gaagcccaggcgatcaagaaccacgccgccaagcagtccatggctgcccgggacatgggg
cgccccggcaagggtccccgcttccgcatcgccctgaccggcacaccggtggagaaccgg
gtgagcgagctctgggccctgatggacttccttaaccccaaggtgctcggcgatgagccc
ttcttccgccagcgctaccggatgccgatcgagcgctacggcgacatgtcctcgctgcgg
gacctcaagggccgcgtcggccccttcatcctgcgccgcctgaagaccgacaaatcgatc
atttccgacctgcccgagaaggtggaactgagcgaatgggtgggcctggcccccgagcag
aagaagctctactccaagaccgtggacgagagcctcgatgccatcgcccggtcgcccctg
ggccagaagcacggtcaggtgctggcgctgctcaccaagctcaagcagatctgcaaccac
ccggccctggccctcaagcaggacccagccgacgcggatgccagcttcttcaaggagttc
gctgcccgtagcgccaaggtgcagcggctggaggaaatcctcgaggaggtgatggaagcg
ggcgatcgggccctgctcttcacccaattcgccgaatggggccatctgctcaaggcccat
ctcgagcacaagtggcgccaagaggtgcccttcctctacggcagcaccagcaagaccgaa
cgccaggccatggtcgaccgcttccaggacgacccccgcggcccgcaactgttcctgctg
tccctcaaggccggcggcgtcggcctgaacctgacccgggccagccacgtgttccacatc
gaccgctggtggaaccccgccgtggagaaccaggccacagaccgcgcctaccggatcggc
cagcagaaccgggtgatggtgcacaagttcatcaccagtggctcagtcgaagagcgcatc
gaccgaatgatcaaggagaagtccaaactcgccgaagacatcgttggctccggtgaggat
tggctcggcggcatggacgtaagccaactcaaagaactcgtcaccctcagtgatgactaa
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