Synechococcus sp. NB0720_010: LY254_11510
Help
Entry
LY254_11510 CDS
T10498
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
syno Synechococcus sp. NB0720_010
Pathway
syno02024
Quorum sensing
syno03060
Protein export
syno03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
syno00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
LY254_11510 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LY254_11510 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LY254_11510 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
syno02044
]
LY254_11510 (ffh)
Enzymes [BR:
syno01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
LY254_11510 (ffh)
Secretion system [BR:
syno02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
LY254_11510 (ffh)
Eukaryotic Sec-SRP protein
LY254_11510 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
CbiA
AAA_16
MeaB
cobW
AAA_33
APS_kinase
VirC1
AAA_31
AAA_22
ParA
ArsA_ATPase
AAA_30
MMR_HSR1
AAA_24
Microp_apicomplexa_20
nSTAND3
ATP_bind_1
Thymidylate_kin
Motif
Other DBs
NCBI-ProteinID:
UPH89881
LinkDB
All DBs
Position
complement(2179697..2181163)
Genome browser
AA seq
488 aa
AA seq
DB search
MFDELSQRFEDAVKNLRGQGAINEGNIDGALKDVRRALLEADVSLPVVKDFVEEVRKKAL
GEEVVRGISPDQKFIQVVHEQLVETMGGENAPLAPAGKEGAPAVVLMAGLQGAGKTTATA
KLGLHLKEKGRRALLVGADVYRPAAIEQLKTLGGQIGVEVFSLGTDAKPEAIAAAGIEKA
KAEGFDTVLVDTAGRLQIDTSMMEEMVRIREAVQPDEVLLVVDSMIGQEAAELTRAFHDQ
VGITGAVLTKLDGDSRGGAALSIRKVSGAPIKFIGTGEKVEALQPFHPERMASRILGMGD
VLTLVEKAQKEVELADVAKMQQKLQEATFDFSDFIKQMRLIKRMGSLGGLMKMIPGMNKI
DDGMLKQGEEQLKKIEAMVGSMTEAERCDPDLLAANPSRRRRIASGSGHTPADVDKVLQN
FQQMRGFMQQMTRGGGMPGMPGMPGMGGMPGMPGMGGMPGMGGMGGRGGGGMPKAPKPAK
KRKGFGQL
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgttcgacgagctctcccaacggtttgaagatgccgtcaagaacctgcgcggtcagggg
gccatcaacgagggcaacatcgacggtgctctcaaggacgtgcgccgggccctactggag
gccgacgtcagccttccggtggtcaaggacttcgtcgaagaggtccgcaagaaggcccta
ggggaagaggtggtgcggggcatcagccccgaccagaaattcattcaggtcgttcacgag
caactcgtggagaccatgggcggcgagaacgcacccctggcccctgccggcaaagagggc
gctccggcggtggtgctgatggcgggcctgcagggcgccggtaaaaccaccgccaccgcc
aagctcggcctgcacctcaaagaaaaaggacgcagggcgctgctggtgggggccgacgtc
taccggcccgcggccattgagcagctcaaaaccctgggcgggcagatcggcgttgaggtc
ttcagccttggcaccgacgccaaaccggaagccatcgccgccgccggcattgagaaggcc
aaggccgaaggcttcgacaccgtcctggtggacaccgccggccgcctccagatcgacacc
tcgatgatggaggagatggtgcggatccgcgaagccgtccagcccgatgaggtgctgctg
gtggtggattcgatgatcggccaggaggccgccgaactcacacgggccttccacgatcag
gtgggcatcaccggtgcggtgctgaccaagctcgacggcgactcccgcggcggggcggcc
ctctcgatccgcaaggtcagcggcgcaccgatcaaattcatcggcaccggcgaaaaggtc
gaggcactccagcccttccaccccgagcggatggccagccgcatcctcggcatgggcgat
gtcctcaccctggtggagaaggcccagaaggaggtcgagctggccgacgtggccaagatg
cagcagaagctccaggaagccaccttcgacttctcggacttcatcaagcagatgcgcctg
atcaagcgcatgggctccctgggcggcctcatgaaaatgatcccggggatgaacaagatc
gacgacgggatgctcaagcagggcgaagagcagctcaagaagatcgaagcgatggttggc
tccatgaccgaagccgagcgctgcgaccccgacctgctggccgccaatccctcccgccgg
cgccggatcgccagcggcagtggccacacccccgcggatgtggacaaggtgctgcagaac
ttccagcagatgcgaggcttcatgcagcagatgacccgcggtggcggaatgcccggcatg
cctggaatgcccggcatgggcggaatgccagggatgcctggaatgggcggaatgcccggc
atggggggaatgggtggccgcggtggcggcgggatgcccaaggcccctaaacccgccaag
aagcgcaaaggcttcggccagctctag
DBGET
integrated database retrieval system
