Synechococcus sp. NB0720_010: LY254_11875
Help
Entry
LY254_11875 CDS
T10498
Name
(GenBank) peptidase domain-containing ABC transporter
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
syno Synechococcus sp. NB0720_010
Pathway
syno02010
ABC transporters
syno03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
syno00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LY254_11875
03070 Bacterial secretion system
LY254_11875
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
syno02000
]
LY254_11875
02044 Secretion system [BR:
syno02044
]
LY254_11875
Transporters [BR:
syno02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
LY254_11875
Secretion system [BR:
syno02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
LY254_11875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Peptidase_C39
AAA_21
AAA_29
AAA_22
AAA_16
RsgA_GTPase
AAA_25
AAA_30
Motif
Other DBs
NCBI-ProteinID:
UPH89947
LinkDB
All DBs
Position
complement(2233137..2236016)
Genome browser
AA seq
959 aa
AA seq
DB search
MRALAQQLGCDHRRFPAGSVLQTSGSSPEVLLVVEGHCRLLDPDRWFGSHTVLRPESPYL
CGALTLLNSDLGEELMASTDCEAIVLGTLPLDPKLEEAVLDHLRSGLSPSELPLIQKYIQ
GYGINVPEDQQTPEIYLRRWQILPTGDPPPKSEPKGPLIYADRSTKGFHYGQLVTSEAIR
CFLGEEKPRVLIWSDAEHPKEEHSRRTAGLRPIDRGDAPTNAAPDSQTTALEQQQPSLAQ
QIRQLGFRPVGGGTAAECHTAVLTMLAQFYGLPMRRDNLRKAGHFLAASEQNLSLEKLVS
VADQFGLAGRIVTFRAADASRLPTPAVILDPQQNPSLIIEANGSGLLILNPNTKAERLNG
EVLSERFGSDLKAVTISAGRHTPQQRFGLSWVLPFLSRYKVGLVEVFISSFLAQLFALAT
PLLFQQIIDRVIGQGSVNALGGFAVVMVLLMVLELIFSNLRTFQFMEISNRVDISLGSAI
ISRLLRLNIRYFEKHPVGELASRLNELDKIRSFLTGTALTVVLDALFAMLYFGVMFFYSP
ILAGIILGSIPLLLLVILGLTPITQHLIRQRAEAYSRTQSYMVEVLNGIQTVKVQNSELT
TRRNWEDRHLDGINKGFRSVLANTASSNALQLINKSSNILVITVGAWLVLQNQLTLGGLI
AFRIISGYVTQPILRLAGTWQNFQEVSLAVERLGDLVNQPLETEDIEDANISMPPIEGTI
RFDQVSFSYGATSGGQLSGVSLTIPKGSFTGLVGQSGCGKSTLLKLIPRLYEPSRGKVLI
DGLDVSKVELYSLRRQLGFIPQDCLLFEGSIYSNIAVADPEAATDQVVEAARLACAHDFI
MGLPYGYSTPVGEKGGGLSGGQRQRIALARMLLQNPNLMILDEATSALDVDTEQQVVRNL
RSHAKGRTLLMITHRLSTLIHADQIVLMHNSRIDSVGTHEELMAQSGRYYALYQQQFGG
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgctctggcacaacaactgggttgtgaccatcgccgattccccgcaggatcggtc
ttgcagaccagtggctcaagtcccgaagtgctgctggtggtggaagggcattgccggctg
ctggatcccgatcgctggttcggcagccacaccgtgctgcgaccggagagtccctatctc
tgcggtgccctgaccctgctgaacagcgacctgggggaggagctgatggcctccacagac
tgcgaagccatcgtgctcggcacgctgcccttggatccaaaactggaggaagcagttcta
gatcatttacgcagcggcctctccccgagtgaactaccgctgatccagaaatacatccag
ggctacgggatcaatgtgccagaggaccagcagactccggagatctacctgcggcgctgg
cagatattgcccacaggagatccaccaccaaaaagcgaaccaaaaggaccactaatttat
gccgatcgctccacaaaagggtttcattacggacagctggtcacatcggaggcgattcgc
tgcttcctgggtgaggagaagccgcgcgttctgatctggagcgacgctgaacatcccaag
gaagagcactccagacgcaccgccgggctacgaccgattgaccgtggggacgccccgacc
aacgcagcgcccgacagccagaccacagcactggagcaacagcaaccaagccttgctcag
cagatccgacaactcgggtttcgccccgtgggtggcggtacggcggcggagtgccatacc
gctgtgctcacgatgctggcccagttctacgggctacccatgcggagagacaacctgcgc
aaagcaggacattttctcgccgccagcgaacagaacctcagcctggaaaagctggtgagc
gtggcggatcaattcgggctggccgggcgaatcgtgacgtttcgggctgccgatgccagc
cgtctgcccacgcctgccgtgattctggatccccagcaaaatccgagcctcattattgaa
gccaatggatccggcctgttaattctcaaccccaacaccaaggctgaacgactcaatggt
gaggtcctgagcgagcggttcggttcggatctaaaggctgtgaccatcagcgcgggccgg
catacaccacagcagcgctttggcctgagctgggtgctgcccttcctgagccgctacaag
gttggacttgtggaggtcttcatctcgagctttctggcgcaactctttgccctggcgaca
ccactgctctttcaacagatcatcgaccgggtcattggccagggttcggtgaatgcgctc
ggcggctttgcggtggtgatggtgctgctaatggttctggaactgatcttcagtaatctg
cgcaccttccagttcatggagatctccaacagggttgatatcagcctgggctcggcaatt
atttctcgcctactgaggctcaatattcgctatttcgaaaagcatcccgtaggcgagctg
gccagccgcctcaatgaactcgacaagattcggagcttccttactggcactgcactcacg
gtggtcctcgatgcactgtttgcgatgctctacttcggggtgatgtttttctactcgccg
attcttgccggcatcatccttggaagtattccactactactgctagtcatccttggcctg
acaccgattacccagcacctgatccggcagcgtgctgaggcgtactcaagaacccagtcc
tacatggtggaagtgctaaacggcatccagaccgtgaaggtgcaaaacagtgagttgacg
acaaggcggaactgggaagaccggcacctcgatggcatcaacaagggatttcgctcggtt
ctagccaacacggccagctccaacgccctgcagttgatcaataaaagcagcaacattctg
gtgatcaccgtgggggcatggctggttctgcagaaccagctgacactgggcggtctgatc
gcgtttcggatcatcagcggctatgtgacccaaccgatcctgcgcctagctggcacctgg
cagaacttccaggaggtctctctagccgtggaacggctcggggatctggtgaaccaaccc
ctagaaaccgaggacatcgaagacgcgaacatcagcatgcccccaatcgaagggacgatt
cgcttcgatcaggtgagctttagttacggagccaccagtggcggacagctgtccggggtg
agcttgacgattcccaagggcagctttacgggtctggtagggcaaagcggctgcggcaag
agcaccctgctcaagttgattcccaggctctatgaaccaagccgaggaaaagtactcatt
gacggcctggatgtcagcaaggttgagctctactccctacgcaggcagctgggatttatt
ccacaggactgcctgctattcgaaggttcgatctactccaacatcgccgtagccgatccg
gaagccgcaacggatcaggtggtagaagcggcacgccttgcctgtgcccacgacttcatc
atgggacttccctatggctacagcactccggttggagaaaagggaggaggtctatctggt
ggacaacggcaacggattgccctggctcgaatgctgctgcaaaaccccaatttgatgatt
ttggatgaggccacaagtgccctcgatgtggatacagaacagcaggttgtgaggaatctt
cgaagccacgccaaaggccgcaccctactgatgatcacccaccgactctccacattgatt
catgccgatcaaattgtcctgatgcacaacagccgcatcgactccgtaggcactcatgaa
gaattaatggcccaatcaggtcgctactacgccctttatcaacaacagtttggaggctaa
DBGET
integrated database retrieval system
