Synechococcus sp. PCC 7502: Syn7502_00129
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Entry
Syn7502_00129 CDS
T02371
Name
(GenBank) DNA topoisomerase I, bacterial
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
synp
Synechococcus sp. PCC 7502
Brite
KEGG Orthology (KO) [BR:
synp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
synp03032
]
Syn7502_00129
03400 DNA repair and recombination proteins [BR:
synp03400
]
Syn7502_00129
Enzymes [BR:
synp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Syn7502_00129
DNA replication proteins [BR:
synp03032
]
Prokaryotic type
DNA Topoisomerases
Syn7502_00129
DNA repair and recombination proteins [BR:
synp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Syn7502_00129
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AFY72301
UniProt:
K9SQT0
LinkDB
All DBs
Position
complement(127730..130177)
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AA seq
815 aa
AA seq
DB search
MSTLVIVESPTKARTIRNFLPSGYRVEASMGHVRDLPQSASDIPASVKSEAWSKLGVNVE
ADFEPLYIIPKDKKKIVSELKAALKDATELILATDEDREGESISWHLLEILRPKVPIKRM
VFHEITSEAIKAALQNCRDVDEKLVHAQETRRILDRLVGYTLSPLLWKKIAWGLSAGRVQ
SVAVRLLVNREQERRAFKSGSYWDLKATLFAPDHEFPAQLVSLGGRQLATGKDFDESTGK
IAKGKNVLLLDEPSAIALLERLNGKVWTVTHQEEKPTTRKPSPPFTTSTLQQEANRKLRL
SARDTMRTAQALYEQGFITYMRTDSVHLSDQAISAARNCVSQMYGENYLSPKPRQYATKS
KGAQEAHEAIRPAGASFRTPQQTGLSGREFSLYDLIWKRTIASQMADARQTMISVQIGVE
DAIFRSSGKRIDFAGFFRAYVEGSDDPDAAIEGQEIVLPKLIIGDHPVCQQLQPVGHETQ
PPARYTEASLVKTLESEGIGRPSTYASIIGTICDRGYAQLTHNTLIPTFTAFAVTSLLEE
HFPNLVDPSFTSKMEQTLDDISTGSVEWLPYLRKFYSGKAGLETLVKDREQAIDPDTART
ITLVGLENIKVKIGKFWAYIQVNEGEKQVSASIPQDLTPADLLPEKIEIILKQKLEGPDQ
IGIHPETGEPIFLLMGQYGAYVQLGQATDAVPKPKRASIPKGVAPEQVTLAMAVDLLKMP
RELGVHPETGKKIEANLGRFGPYVVHKKGGAEGKDDFRSLKGDDNPYTVTLERALELLAQ
PKTLRAGAAKVIRTLGLHPVDQEPSDRPIVSERTS
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacccttgttattgtcgagtcacctaccaaagcccgcactattcgtaattttttg
ccctctggttatcgagtagaagcatctatggggcatgtgcgtgacttgccacagtcagct
agtgatattcctgccagtgttaaatctgaggcttggtcaaagctaggggtaaatgtagag
gcggattttgagccattgtatataatccccaaggacaagaaaaaaattgtttctgagcta
aaagctgcgcttaaagatgctacagagttgatactagcgacggacgaagatcgtgaaggt
gagagtatatcttggcatttgctagaaattttgcgtcccaaagtgccaattaagcgcatg
gtattccatgaaattacctccgaagcgattaaagcggctttgcaaaactgtcgagatgtg
gatgaaaagttagttcatgcccaagagactagacggattttagatcggttagtaggttac
acgctgtcgccattattatggaaaaaaattgcttggggcttatcggctggacgggtgcag
tcggtggcagtgaggttattggtaaatcgagaacaggaacggcgggcgtttaagtctggt
agttattgggatttgaaggctaccctgtttgctcccgatcatgaatttcccgcccagtta
gttagtttaggcggtaggcaattagccacaggtaaggattttgatgaatccacaggtaaa
attgctaagggtaaaaatgttttattactagatgaacccagtgcgatcgctttactggaa
agattaaatggcaaagtctggactgtcacccatcaagaggaaaaacctactacccgcaaa
ccttctcctccttttaccacatcgaccctccagcaagaggcaaaccgtaaattgcgcctt
tccgcacgggacacaatgcgaacagcccaagcgttgtatgagcaaggttttattacctat
atgcggacagattcggtacatttatccgatcaggcgatctccgcagctagaaattgcgtg
agccaaatgtatggggaaaattatttaagtcctaagccacggcaatatgccactaaatct
aaaggagctcaagaggcgcacgaggcaattagacctgctggagcaagttttcgtaccccc
caacaaacgggtttaagtggtcgagagttttctctttacgatttaatttggaaacgcact
attgcctcccaaatggcagatgccagacaaactatgatctcggtacagataggggtagaa
gatgccatttttcgttcttcaggcaaacgtatcgattttgcagggttctttagggcatac
gtggaaggttccgatgatccagacgcagcgatcgaaggacaggaaattgtactgcctaag
ttaattattggggatcatcctgtctgccagcagttacaacccgtgggtcatgaaactcaa
ccacctgcccgttatactgaggcatccttggttaaaaccctagaaagtgaaggcattggt
cgtcctagtacctacgctagtattatcggtaccatttgcgatcgcggctatgcccaatta
acccacaacacgctgatcccgacctttactgcctttgcggttacgtctttactggaagag
catttccccaacttagtggatcccagctttacttccaaaatggaacagactcttgatgat
atttccacgggtagtgtggaatggttgccctatttacgcaaattctattcgggtaaggct
ggactagaaaccttagttaaagatcgagaacaggcgatcgaccctgatactgctcgcaca
attaccctagttggactagaaaatattaaagttaaaattggcaaattttgggcatatatt
caagttaatgaaggtgaaaaacaggtatctgcctcaatccctcaagatttaacccctgcg
gacttactacccgaaaaaatcgagattatcctcaagcaaaaattagaaggtcccgatcaa
attggtattcatcctgaaactggagagccaatctttttgctgatggggcaatacggagct
tatgtgcagctaggacaagccaccgatgccgtgcctaaacctaaacgagcctctattcct
aaaggagtagcacccgaacaagtaaccctagctatggcggtagatttacttaaaatgcca
agggaactaggagtgcatccagaaacaggtaaaaagatcgaagcgaatctgggtaggttt
ggtccctacgtcgttcataaaaagggtggggctgagggcaaggatgatttccgatcgctt
aaaggtgatgacaatccttatacagtaaccctagaacgtgccttggaattactagctcaa
cctaaaacattaagagcaggggcagctaaagtgattcggactttgggtttacatcctgtg
gatcaagaaccaagcgatcgccctattgtcagtgaaagaaccagctaa
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