Synechococcus sp. PCC 7502: Syn7502_00618
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Entry
Syn7502_00618 CDS
T02371
Name
(GenBank) WD40 repeat-containing protein
Organism
synp
Synechococcus sp. PCC 7502
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_THOC3
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WD40_Gbeta
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_IFT122_1st
Beta-prop_CAF1B_HIR1
WDR55
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EML
NBCH_WD40
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_Aladin
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_C
Beta-prop_Vps41
SpoIIE
Beta-prop_WDR41
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
RMC1_N
Ge1_WD40
Beta-prop_IP5PC_F
Beta-prop_IFT140_1st
eIF2A
Beta-prop_HPS5
Beta-prop_WDR75_2nd
Tricorn_2nd
Beta-prop_RIG_2nd
Beta-prop_DCAF12
Beta-prop_ELP1_1st
Beta-prop_ACSF4
Tricorn_N
Bflower_3
PROPPIN
Beta-prop_pof12
DUF7899
B-prop_COPA_B_2nd
WD40_like
Motif
Other DBs
NCBI-ProteinID:
AFY72767
LinkDB
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Position
627767..630940
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AA seq
1057 aa
AA seq
DB search
MPSSDELSSGRLLQRSLLPQAIPSYLGLDIAADVWTAVDLGGDYYQFLEQPGILGVAIAD
SSGKSVAGAIHAALFKGQLDAFATQGRLRNPTTVMTSLNQLLCATNTDDAVALAYGVLDL
ETYEFQIGNAGIPGPVIYRAATKSCEETVNPSMALGRYEGIPYRTLTKPFNEGDIAIFFS
DGLYEASNANGDEFGTANDKGISPLKFVISSLAHLPAAKILVGLKLALDKFTGREIPEDD
VSIVVIKLNQKVAMTKTRDCPYQEALQAWMRSDEKDDSALLRGTRLVEALGWAKAQPSLS
RLDTEFLEASERVNEREQMQAQLLEAATSRAAAADRLEKLSQDLAKSLESEKQQRIQAEM
GEISERIVALTMSSEALFLSHNHIEALISSVIAGVKIRQLTSQVTNGIAHLKANTQIRTI
TALEQVIYGIHEYNRYEGHGFWVNKVCFSADGKFLVSASSDRTIKVWNINGTLLQTLYGH
TNWVTSVAISPNGKMIASASRDNMIRLWNWDQTIGAFKETGSTMLKGHDGPVLDVCFSSD
GEYIASAGEDTTVRLWKANGTLIKTFRGGHERWVTCVAFNPNGKEVVSGSADRTLIIWNI
NGAVVKTLKGHDSFVEAVAYEPHGQAIISGSRDRTMKLWGSDGVLLRTFHGHTDKLWSVA
YSPDGKTIASAGSDRTIKVWDTDGTLLRDLAGHGDAVNSIAFSPDGKSLASASRDTTVKL
WNIRGNPLRKLLAQDDVWAAAFSPNGKFIATGGKDKNVNIWNMAGNLVASLSGHNDAINS
ICISPDSSVILSASTDSSIKSWSPDGRAIDTLNGHRSEVYCLSFRSDGQVFASASADNSV
RLWSADGVWLQTLNGHTAEVYAVCFSPDGSMLVTAGKDKIINLWSWDGRLVYSFEGHSAE
VLTLCFSSDNSTFASGSMDQSVKIWSVDGSLLKTLNGHSAEVRSICFSPDGKTIASASED
TLVQLWSLDGTLLRTFNGHKSAVKSISFSANGKILMSASADKSVILWNLDLDNLLMRGCS
WLQEYLKTNTNVSEEDRRNCLGGCSWLYKHLKSNAAS
NT seq
3174 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccagtgacgaattaagtagtggtagattactacaaaggagtttgctccctcaa
gctatccctagttatctggggctagatattgctgcggatgtatggacagcggtggattta
ggtggtgactattatcaatttttagagcaaccaggaattttgggtgtagcgatcgctgac
tcttcgggaaagtctgtggctggtgccattcatgctgctttatttaaaggacaattagac
gcttttgcgacccaaggaagactgcggaaccctaccacggtgatgacatcgctgaatcaa
ttactatgtgccactaataccgatgatgctgtagctctagcctatggagttttagaccta
gaaacctatgaatttcaaattgggaatgcgggaattcctggtccagttatctatcgtgct
gccacaaaaagctgtgaagaaacagtcaatccctctatggcactgggtcgatacgaaggc
atcccctacagaaccctaaccaagccttttaatgaaggtgacatcgccattttctttagt
gatggattatacgaagcgagcaatgccaatggagatgagtttggtactgctaatgataaa
ggtattagcccgttaaagtttgtcattagtagtttggctcacctccccgccgcaaaaatt
ttggttggcttaaaactggcactagataaatttacgggacgggaaattcccgaagatgac
gtatccattgtggtgattaagctgaaccaaaaggtggcgatgaccaaaactcgggactgc
ccctaccaagaagcattacaggcatggatgcgctctgatgaaaaggatgattccgcttta
ctgcgtggtaccagattagttgaagctttaggctgggcaaaggcgcaaccaagtttaagt
agactggatacagaatttttagaagccagtgaacgggtcaatgagcgcgaacaaatgcag
gctcaattactagaggccgctactagtagggctgcggctgccgatcgcctcgaaaaactg
agtcaagaccttgccaaaagcctagaaagtgaaaagcagcaacgcattcaagcggaaatg
ggagaaattagtgagcgaattgtagctctgaccatgtcctctgaggcattatttctttcc
cataatcacattgaagctttaatttctagcgtgatagctggggttaaaattcgccaactc
acttcccaagttaccaatggcattgcccacctgaaagcaaatacgcaaattcgcacgatc
accgccctagaacaagtaatttacggaatccatgaatacaaccgctatgaaggacatggt
ttttgggtaaataaagtctgcttcagtgccgatggtaagtttttggtttccgctagtagc
gatcgcacgatcaaagtttggaatatcaatggcacattactacaaaccctctacggacat
actaattgggttacaagtgttgctattagtcccaacgggaaaatgatcgcctctgctagt
cgggacaatatgattaggctgtggaattgggatcaaaccattggtgccttcaaagaaact
ggctccactatgcttaaaggacatgatggtccagtcctagatgtctgttttagctctgat
ggtgaatacattgcctcggcgggagaagatacaaccgtaaggctatggaaagccaatggt
accttaattaaaacttttcgaggtggacatgaacgctgggttacctgtgttgcttttaac
cccaatgggaaagaggtggtttcaggaagtgctgatcgcaccctaattatttggaatatc
aatggggctgtggttaagactctcaaaggacatgatagctttgtggaagctgtggcatac
gagccccacggacaggcaattatttctggtagccgcgatcgcaccatgaagctttggggt
agtgatggagtacttttacgcactttccacggacatacggataaactttggagtgttgcc
tattcccctgatggtaaaaccattgcctccgcaggtagcgatcgcacgatcaaagtctgg
gataccgatggcaccttactcagagacctagctggacatggcgatgccgttaatagtata
gcttttagccctgatggcaaaagtctagcttctgccagtcgggatacaaccgtaaaatta
tggaatattcgcggtaatcccctgcggaaactcttagcacaagatgatgtttgggcagca
gcctttagtccgaacggtaaatttattgccactggtggtaaagacaaaaatgtaaatatt
tggaatatggcgggaaatttagtagcgagtttgtctggacataatgatgccatcaatagc
atttgtattagccctgatagctccgtgattctatcggcaagcactgacagtagtattaaa
tcctggagtcctgatggtagggcgatcgacaccctcaatggtcacagatcagaggtttat
tgcctgagttttagatccgatggacaggtatttgcctctgccagtgctgataacagcgta
aggctatggagcgcagatggagtatggttacaaaccttaaatgggcataccgcagaggtc
tatgccgtttgctttagtcccgatggcagtatgttagttacagcaggcaaagataaaatc
attaatctctggagttgggatggcagactggtttacagctttgagggacatagtgctgaa
gttttgaccctctgctttagttcagataatagtacctttgcctcgggtagcatggatcaa
agtgtaaaaatttggagcgtagatggttccctccttaaaaccctgaatggtcatagtgcc
gaagttcgcagtatttgttttagtcccgatggcaaaaccatagcctccgctagtgaagat
actctggtacaactttggagcctagatggtactttactaagaacctttaacggacataaa
agcgcagtcaagagtatttctttttcagccaatggcaaaatcttgatgtctgcaagtgcg
gataaatccgtaattctctggaacttggatttagataatttgctcatgcggggttgcagt
tggctacaggaatatctaaaaaccaatacaaatgtatccgaagaagatcgccgtaattgt
ttaggtggctgtagttggctgtataagcaccttaaatctaatgctgccagctag
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