Synechococcus sp. PCC 7502: Syn7502_01087
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Entry
Syn7502_01087 CDS
T02371
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
synp
Synechococcus sp. PCC 7502
Pathway
synp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
synp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Syn7502_01087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
synp03019
]
Syn7502_01087
03110 Chaperones and folding catalysts [BR:
synp03110
]
Syn7502_01087
03029 Mitochondrial biogenesis [BR:
synp03029
]
Syn7502_01087
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
synp04147
]
Syn7502_01087
Enzymes [BR:
synp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Syn7502_01087
Messenger RNA biogenesis [BR:
synp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Syn7502_01087
Chaperones and folding catalysts [BR:
synp03110
]
Heat shock proteins
HSP60 / Chaperonin
Syn7502_01087
Mitochondrial biogenesis [BR:
synp03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Syn7502_01087
Exosome [BR:
synp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Syn7502_01087
Exosomal proteins of other body fluids (saliva and urine)
Syn7502_01087
Exosomal proteins of breast cancer cells
Syn7502_01087
Exosomal proteins of colorectal cancer cells
Syn7502_01087
Exosomal proteins of bladder cancer cells
Syn7502_01087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AFY73197
UniProt:
K9SRG3
LinkDB
All DBs
Position
complement(1101684..1103312)
Genome browser
AA seq
542 aa
AA seq
DB search
MAKRIIYNEDARRALERGMDILTEAVAVTLGPKGRNVVLEKKFGSPQIINDGVTIAKEIE
LEDNVENTGVALIRQAASKTNDAAGDGTTTATVLAHAIVKEGMRNVAAGANAISLKRGID
KASSFLVEKIAAHSRPVVDSKAIAQVGSISAGNDEAVGQMIADAMDKVGKEGVISLEEGK
SMTTELEITEGMRFDKGYISPYFVTDSERMEASLEEPFLLVTDKKIALVQDLVPVLEQVA
RTGRPLLIIAEDIEKEALATLVVNRLRGILNVCAIKAPGFGDRRKAMLEDIAVLTGAQVI
TEDAGLRLDTVKLDALGKSRRIVITKDTTTIVAEGNEAAVKTRCEQIRRQIEESDSSFDK
EKLQERLAKLAGGVAVIKVGAATETEMKDRKFRLEDAINATKAAVEEGIVPGGGTTYAHL
APELETWANAHLKAEELTGALIVAKALLAPVKRIAENAGQNGAVIAERVKEKDFNTGYNA
MTNQFEDMFTAGIVDPAKVTRSALQNAASIAGMILTTECIVVDKPEEKAAAPAGGGAGDY
DY
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcgaattatatataacgaagatgcccgtcgtgcactcgaacgtggtatggat
attttgaccgaagcggtagctgttacccttggtcctaaaggcagaaatgtcgttttagaa
aagaaatttggttctccccaaatcattaatgatggtgtcacgatcgccaaagaaattgaa
cttgaagataatgtcgaaaatactggtgtagctttgattcgtcaggctgcctctaagacc
aatgatgcggctggagatggtacaactacggcaactgtactggcacatgcgatcgtcaaa
gaaggtatgcgtaacgtcgctgctggagctaatgcgatttccctgaagcgtggtattgat
aaagcgtctagtttcttagttgaaaaaattgcggctcattctcgtccagtagtcgattct
aaagcgatcgctcaagttggctcaatttctgcaggtaacgatgaggctgtaggacaaatg
attgccgatgctatggataaggttggcaaagaaggcgtaatttccctcgaagaaggtaag
tctatgactaccgaactggaaattaccgaaggaatgcggtttgataagggctacatctcc
ccatactttgtcactgactctgagcgcatggaagcttccctagaggaaccattcttatta
gttacagataagaaaattgccctagttcaagaccttgtacccgttctggaacaagtagcc
cgcactggtcgtcctctattaattattgctgaggacattgaaaaagaagctttggcaacc
ctagtggtcaaccgtctccgtggcattttgaatgtgtgtgctattaaagctcctggattt
ggcgatcgccgtaaagccatgctggaagatattgctgtgctaactggtgctcaagttatt
actgaagatgcaggattacgtttagacacagtcaagttagatgcgctgggtaaatctcgt
cgtattgtgatcactaaagatactacaaccattgtggctgaaggtaatgaagctgcggtg
aagacacgttgtgaacaaatccgtcgccaaatcgaagaatctgattcctcctttgataag
gaaaaactccaagagcgccttgctaaattagcgggtggtgtagctgtaatcaaagttggt
gctgctacggaaactgaaatgaaggatcgcaagttccgtttagaagatgccatcaatgct
actaaagctgccgtagaagaagggatcgttcccggtggtgggacaacctatgctcaccta
gctcccgaactcgaaacttgggcaaatgctcacctcaaggcggaagagcttacaggtgca
ttgatcgtagccaaggctttattggctcccgttaagcgtattgctgaaaatgctggacaa
aatggtgccgtaattgccgaaagagtcaaggaaaaagactttaatactggctataacgct
atgaccaaccagtttgaagatatgtttactgctggtattgttgatcctgctaaagtaact
cgttctgctttacaaaatgccgcttcgatcgcaggcatgattctaaccacagaatgtatt
gttgtagataagcccgaagaaaaagctgctgctcctgctggtggcggtgctggagactac
gattactaa
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