Synechococcus sp. PCC 7502: Syn7502_01298
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Entry
Syn7502_01298 CDS
T02371
Name
(GenBank) dsRNA-specific ribonuclease
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
synp
Synechococcus sp. PCC 7502
Brite
KEGG Orthology (KO) [BR:
synp00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Syn7502_01298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
synp03019
]
Syn7502_01298
03009 Ribosome biogenesis [BR:
synp03009
]
Syn7502_01298
03036 Chromosome and associated proteins [BR:
synp03036
]
Syn7502_01298
Enzymes [BR:
synp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
Syn7502_01298
Messenger RNA biogenesis [BR:
synp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Syn7502_01298
Ribosome biogenesis [BR:
synp03009
]
Eukaryotic type
90S particles
RNase
Syn7502_01298
Prokaryotic type
rRNA processing factors
Syn7502_01298
Chromosome and associated proteins [BR:
synp03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
Syn7502_01298
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
Motif
Other DBs
NCBI-ProteinID:
AFY73392
LinkDB
All DBs
Position
complement(1323078..1323794)
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AA seq
238 aa
AA seq
DB search
MIAPSRQRELRQLLNRIQIPEESINWNLLDQALIHPSFSTVHNNDYLEFFGDSVLRMVVV
TFLREQYGDRSVGDLAALRSHLVSDKVLAAIADGYGFDRFLVMGESAKRDPKTSLSRLAN
SFEAVLAALYLSTNDFRLINQWLYPHLQRISITVLAQPAFGNSKAALQELTQANWHILPE
YKAIDSSEPQIFMVEVWVNNFCWGVGKGSSIKAAQQEAAAIALPALTKSLNSSAKNKS
NT seq
717 nt
NT seq
+upstream
nt +downstream
nt
atgattgcccccagtcgccagagggaattgagacagttactaaatcgtatccagatacca
gaagaaagtattaactggaatttattggatcaagctttaattcatccatccttttctaca
gttcataacaacgactatttagaattttttggggatagtgtgctgaggatggtagtggta
acttttctgcgcgagcagtatggcgatcgctctgtaggagatttagcggcattgaggtcg
catttggttagtgataaggtattggcggcgatcgctgatggctatggatttgatcgattt
ctagtcatgggggaatcagcaaaacgtgatcccaaaacctctttatctaggctggctaat
agttttgaagctgtcttagctgctctttatttgagtacaaatgattttaggttaattaat
cagtggctatatccgcacttacagcgtatctcgatcacagtgctagcccaacctgctttt
ggtaattccaaggcagccttacaggagttaacccaagctaattggcatattttgcctgag
tacaaagcaattgactcttctgaacctcaaatatttatggtggaggtctgggtaaataat
ttctgttggggtgtgggtaagggcagtagtattaaagcggctcaacaggaagcagctgct
atagctctgcctgctttaaccaaaagcctaaactcatccgcaaaaaacaaatcttaa
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