Synechococcus sp. PCC 7502: Syn7502_01644
Help
Entry
Syn7502_01644 CDS
T02371
Name
(GenBank) ATPase involved in DNA repair
KO
K03546
DNA repair protein SbcC/Rad50
Organism
synp
Synechococcus sp. PCC 7502
Brite
KEGG Orthology (KO) [BR:
synp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
synp03400
]
Syn7502_01644
DNA repair and recombination proteins [BR:
synp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Syn7502_01644
Archaeal homologous recombinant proteins
Syn7502_01644
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_27
Rad50_zn_hook
SbcC_Walker_B
AAA_29
AAA_21
Fib_alpha
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
AFY73700
UniProt:
K9SU64
LinkDB
All DBs
Position
complement(1634857..1637883)
Genome browser
AA seq
1008 aa
AA seq
DB search
MIPQKLSLTNFLSYQNLALDFSGLHIACICGANGAGKSSLLEAMTWALWGISRANSEDDM
IYVGAKEAKVDFVFKAQGQIYRIIRTRPKGSAGSLEFQIKNNEQFKSLTERGLRATQQVI
IAHLKMDYSTFVNSAYLRQGRADEFMLKRPSDRKAVLAEMLNLGQYDELSEKAKDITRIC
KGEITALENARQNLETQITAGAHIDSDLQTLTSELEQVQAQDAVTQQQLVVLQQTQQQRQ
NWEQRWQWQQQQTQQLNSEIARLQQQVDQQYQQIKNLENLLNHQETITNQYRHYQQLANQ
EAAYNHKLQQYQKISGDRTHIQQQLAEKKSELNGSLRHYQAQLELIMQQKQDLQNILNKA
PEIESVIAQLQQAKIKLQEVEELQIKSVPLYQRRQVLQRTIDREIAQIHAQLDQIQKQQQ
LLRSQAQPNLIHNLQGLEQQIKILEKKQVYQQRVHEKGLERRDFLNRLKERQLDCEQRIQ
EQQTKSQQLQQPDTPCPLCDRPLDQAHWQIIAQKHQVLSQELQAELWIIKEQQSASECEI
QVLRDEYRHLKEELEQLNPLLQKKGNLEAQLTSHHQAESKLQGLDQDIQALQHKLDRQNF
CTDDRNNDQNDAQTELQLIEASLSSLNYDEKNHALARGEVERWRWAEAKVNELKTSRRQW
ESLSIKIPELQALIQKLAHHLHTNTIDLELQQRLETCDRTLEQINYDPDQHQEIRTQKEQ
AQPFLLQYQELNLAQQQYPNLLAEFQKNQNLMSDRTVELQRITTEIRSLELSLQETPDPS
SQIQDLQGQIINRRSHLDHLIGEIGRLQAAQTQRQYLLNQLQQVTAQISQTQKRQLIHQE
LQQAFGKNGIQALMIEIILPQIEAEANRILSTLSNYQLNVRFITQKAGKKADKVIDTLEI
EIADSRGTRPYETYSGGEVFRINFAIRLALARITAQRMGGTLQTLIIDEGFGTQDSEGCD
RLLSAINAIASDFACILVITHMPQLKEAFSTLIEITKTESGSKINLLV
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgattccccaaaagctaagcctgacaaatttcttgagctatcaaaatctggctttggat
ttttcgggcttgcatattgcctgtatttgtggtgccaatggagcgggtaaatcttcatta
ttagaggcaatgacttgggcattatgggggatcagtcgtgccaatagcgaagatgacatg
atttatgtcggagcaaaggaggcaaaggtagattttgtctttaaggcgcagggacagatt
tatcggattattcggactcgccccaagggtagtgcaggttcactggaatttcaaattaaa
aataacgaacagtttaagtctctgaccgaacggggattgagggcaacgcagcaagtgatt
attgcccacctcaaaatggattacagtacttttgtcaactctgcctacttacgacaggga
cgggctgatgaatttatgctaaaacgtcctagcgatcgcaaggctgtactcgcagaaatg
ttaaatttagggcagtatgatgaactcagtgaaaaggcaaaggatattaccagaatttgt
aaaggtgaaatcacggcattagaaaatgcccggcaaaacctagaaacccaaattactgcg
ggcgcacacatagattctgatttgcaaactctaacttcagaattggagcaggttcaagct
caagatgctgtgactcaacaacagttagtggttcttcaacaaacacaacaacaacggcaa
aactgggagcaaagatggcaatggcagcagcaacaaactcaacaattgaactcagagatc
gcaaggttacagcaacaagtcgatcagcaatatcagcaaattaaaaatctagagaatcta
ctaaatcatcaagaaacaattacgaatcaatatcggcattatcagcaattagctaaccaa
gaagcagcctataaccacaaactccagcaatatcaaaaaattagtggagatcgcacacac
atacaacaacagttagcagaaaagaaaagcgaactcaatggcagcctacgtcattatcag
gcacagctagagttaataatgcagcaaaaacaagacctgcaaaatattttaaataaagct
ccagaaattgaatcggtgatcgcccagttgcaacaggcaaaaattaagctccaagaagtc
gaggaactgcagatcaagtctgtacccctataccaacgtcggcaagttttgcaaagaacc
attgatcgagaaattgctcaaatccatgcccaactagatcaaattcagaaacagcagcaa
ctactgcgatcgcaagctcaacccaatttaatccataatttacagggactagagcagcaa
attaaaattctggaaaaaaagcaagtttaccaacaacgagtccatgaaaaagggctggaa
agacgagatttcctcaatcggctaaaagagcgtcaactagactgtgaacaaaggattcaa
gagcaacaaactaaatcccagcaactacaacaacctgatactccctgtcccctatgcgat
cgccccttagatcaggcacattggcagataattgcccaaaaacaccaggtactatcccaa
gaattgcaggcggagctttggattattaaagaacaacaaagtgcttcagagtgtgaaatt
caagttctgagagatgagtaccgccaccttaaagaagagctagaacaattaaatccgctt
ttacaaaaaaaaggtaacctcgaggcacagttaacatcccatcaccaagctgaatctaag
ctccaaggattagaccaagacatccaagccttacaacacaaacttgatcgccaaaacttc
tgcactgacgatcgaaataatgatcaaaatgatgctcaaacggaattgcaattaatagaa
gccagcctatccagccttaactatgatgaaaaaaatcatgcccttgcccgtggggaagta
gaaagatggcgatgggcagaagccaaagtcaatgagcttaaaacctctcgccgtcagtgg
gaaagcctatctataaaaattccagaactgcaagccctcatccaaaaattagcgcaccat
ttgcacaccaataccattgatctggaattacaacaacgtcttgaaacctgcgatcgcacc
cttgaacaaattaactacgatcccgatcagcatcaagaaattagaacccagaaagaacaa
gctcagccttttttgctgcaatatcaagaattaaacttggcacaacagcagtaccctaac
ctgctcgccgaatttcagaaaaatcaaaacctgatgagcgatcgcactgtagaactgcaa
aggatcaccaccgaaattaggagcctagagcttagtcttcaggaaacccccgatccctca
agtcaaattcaagaccttcaagggcaaatcataaacaggcgatcgcatttagatcatcta
attggggaaatcggtaggctccaagccgcccaaacccagcgtcaatatctgctcaatcaa
ttgcaacaggttactgctcaaattagccaaacccaaaaacgccaactcatacaccaagaa
ctacagcaagcatttggcaaaaatgggattcaagcattaatgattgaaataattctgccc
caaattgaagccgaggctaaccgcattctctcgacgctgagcaactaccagttaaacgtc
agatttattacccaaaaagcaggtaaaaaagctgataaagtcatagacaccctagaaatt
gaaattgccgatagtcgtggtacccgtccctacgaaacctactctgggggcgaagtattt
cggattaattttgcaattaggttagcactagcaaggattactgcccaacgtatgggtgga
acgctacaaaccttaattattgatgaaggctttggtacccaagattctgagggttgcgat
cgcctactttctgctattaatgccatagcttcagactttgcctgtatcctagtaattacc
catatgccccaactcaaagaagcatttagcaccctaattgagatcacaaaaactgaatca
ggttcaaaaatcaaccttctggtttag
DBGET
integrated database retrieval system
