Synechococcus sp. PCC 7502: Syn7502_01703
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Entry
Syn7502_01703 CDS
T02371
Name
(GenBank) hypothetical protein
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
synp
Synechococcus sp. PCC 7502
Pathway
synp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
synp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Syn7502_01703
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
synp03019
]
Syn7502_01703
Messenger RNA biogenesis [BR:
synp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Syn7502_01703
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
Lactamase_B
RNase_J_C
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
AFY73756
LinkDB
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Position
complement(1690299..1692149)
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AA seq
616 aa
AA seq
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MTKSPVTLRKTETKTEPKIVKTSTSDTPALKMMALGGLKEIGKNTWVFEINNEIMLLDAG
LSFPDDGMPGVNIVLPDMTYLRENKHKIKGMIVTHAHEDHIGAIAFQLKQFEIPVIYGPR
LAMALLEEKLTEAGVLNRTELRRVAPRDIVRIGSSFFVEFIRNTHSMADSFSVAINSPAG
LVIHTGDFKFDHTPVDGEFFDIQRLAEHGEKGVLCLISDSTNAEIPGYTPSERSVYPGLE
RAFASAKGRVIVTTFASSVHRLSIILDIAEKQGKIVGVIGRSMLNVIAHARNLGYIKCRD
ELLQPLQNLRHYRDDQILILTTGSQGESNSALTRMANGSHRQLQIQAGDTVVFSSNPIPG
NTIPVVRVIDKLISLGANVIYGKDKGIHVSGHGAQEDQKLMLNLVRPKFFFPTHGELRML
MQHSKMAQEMGIPKENIVIAENGDVVEVCVQHIRIVDKVPSGVELVDASRDGVVKGEVLR
DRQQIAADGIVTVAATIGLDGKLATELDVQLNGVVSLIERSQLTTHIQKVIEDTLGNRWA
DFVHNNGEKSEVDWVGLRYQLERDITRMLKNQMQSRPMLVLLLQKSISGSSKPPMAITSL
TTTPAEGKRRRTAAVS
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgactaaatctcctgtaaccttgagaaaaaccgaaaccaagactgaacctaaaattgtc
aagacatccacatctgatactcccgccctaaaaatgatggcactaggcggactcaaagaa
attggtaaaaatacatgggtatttgaaattaacaacgagattatgttgctggatgcgggc
ttatctttccccgatgacggtatgcccggtgtcaatattgtgctacctgatatgacctat
ttgcgagaaaacaagcacaaaatcaaagggatgattgtgacccatgcccatgaagatcat
ataggagcgatcgctttccaattaaagcaatttgagattcctgtaatctatggacctcga
ttggcgatggcactcctagaagaaaagctcacagaagcaggggtattaaaccgtacagaa
ttacgccgagttgccccccgtgatattgtcagaattggtagtagcttctttgtggagttt
atccgcaacacccactcgatggcagatagtttttccgttgccattaatagccctgcgggt
ttagtcattcacacaggagattttaagtttgatcacacccctgtggatggcgagttcttt
gatattcagcgtctggctgagcatggcgaaaaaggcgtgctgtgcctaattagtgattcc
accaatgccgagattccgggctacactcctagcgaacgttcagtatatccaggcttagag
cgagcttttgccagtgctaagggcagagttattgttacgacgtttgcttcttctgtacat
cgcctgagtattattctagatattgctgaaaagcagggcaagattgtcggtgtaattggt
cgctccatgctgaatgtgattgcccatgcccgtaatcttggctatatcaaatgccgtgat
gaattacttcagcctttacaaaatctgcgccattaccgtgatgatcaaattttaatttta
accacaggttcccaaggcgagtcaaattctgcgctcacacgcatggcaaacggtagccac
agacaactgcaaattcaagcgggtgacacggtcgtattttcttccaatcctattcccggt
aataccatccctgtagtgcgagtaattgataaattgatttccctaggggcaaacgtaatc
tatggaaaggataaaggtattcatgtgtcgggacatggcgctcaagaagatcaaaagctg
atgttaaatttagttcgacctaagtttttcttccctacccacggtgaactcagaatgtta
atgcagcacagtaaaatggctcaggaaatggggattcccaaggaaaatattgttattgcc
gaaaacggtgatgtggttgaagtttgcgtccaacatattcggattgtggataaggtgcct
tcgggtgtggaactagtcgatgcttcccgtgatggggtggttaaaggagaggttcttcgc
gatcgccaacaaattgcagccgatggcattgtcactgtggcggcaacgattggactagat
ggcaaactggcaacggagctagatgtgcaactaaatggcgtggtttctctaattgagcga
tcgcagctaactacccatattcaaaaagtgatcgaagataccctaggaaatcgctgggct
gactttgtacataataatggcgaaaaatcagaagtggattgggtaggcttacgttatcaa
ctagagcgagatattacacggatgctcaaaaatcaaatgcaaagtcgtcctatgttagtc
ttattactacagaagtcaatatctggtagctctaaacctccaatggcgatcacttctttg
actacaactcccgccgaagggaaaagaagacgcactgctgctgtatcctaa
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