Synechococcus sp. PCC 7502: Syn7502_02437
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Entry
Syn7502_02437 CDS
T02371
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family
KO
K03090
RNA polymerase sigma-B factor
Organism
synp
Synechococcus sp. PCC 7502
Brite
KEGG Orthology (KO) [BR:
synp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
synp03021
]
Syn7502_02437
Transcription machinery [BR:
synp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Syn7502_02437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
SpoIIID
KORA
HTH_Crp_2
HTH_24
Sigma70_ECF
HTH_17
HTH_3
MarR_2
HTH_23
HTH_10
HTH_38
HTH_Tnp_ISL3
HTH_11
HTH_50
Trp_repressor
Crp
TnsD
LacI
Xre-like-HTH
Motif
Other DBs
NCBI-ProteinID:
AFY74420
LinkDB
All DBs
Position
2423862..2424683
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AA seq
273 aa
AA seq
DB search
MESYSALKTEQLNAAKVREFSAEDKQQTLEILKAYRLAPCARLRNQLVQLNIGLVKKEVG
YWLRQSSEGYEDLLQVGCMGLIGAIERFEISKGYAFSSFATRYVRGEIQHYLRDKCSTLR
VPRRCLELYHQATRKASELRFQLDREPSEAEVANALGVTAIEWQEIKLANRNRSLLSLDA
PMLSLEEGSVTLSDLVPDPKQNSTVQAEDITPLYQALNILEQRTRKILEYVFLEDITQRE
VAKLLGISTVTVSRQVKKGLSTLRSNLALQQAA
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atggaaagttattcagccctcaaaacagaacaattaaatgctgccaaggtgcgagaattt
tctgccgaagataagcagcaaaccctagaaatcctaaaggcatatcgtttagctccctgc
gctcgactccgtaatcagctagtgcagttaaatattggcttagtgaaaaaagaagttggt
tactggttgcgtcaaagttctgaaggctatgaagacctattgcaagttggttgtatgggt
ttaattggggcgatcgaacgatttgaaatcagtaagggctacgcctttagctcttttgct
actaggtatgtgcggggcgaaattcaacattatttaagggataaatgctctactctgaga
gtgccaagacgatgcctagagctatatcatcaagctacgcgtaaagcttcagaactgcgg
tttcaattagatcgagaacccagtgaggctgaagttgctaatgctttgggtgtaactgcg
atagaatggcaagaaattaagttagccaatcgcaaccgctcgcttttgagtcttgatgca
ccaatgctatccctagaagaagggtcggtaaccctttcagaccttgtgccagaccctaaa
caaaactcaacagtacaagcagaagatattacccctctatatcaggcattaaacattctg
gaacagcgtacccgtaaaattttagaatatgtatttttagaagatattacccaacgggaa
gtcgcaaagctgttaggtatcagtaccgtcactgtgtccagacaggtaaagaaaggttta
tctactctacggagtaacttggcattgcaacaggcagcttaa
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