Synechococcus sp. PCC 7502: Syn7502_02524
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Entry
Syn7502_02524 CDS
T02371
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
synp
Synechococcus sp. PCC 7502
Pathway
synp03410
Base excision repair
synp03430
Mismatch repair
synp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
synp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Syn7502_02524
03430 Mismatch repair
Syn7502_02524
03440 Homologous recombination
Syn7502_02524
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
synp03400
]
Syn7502_02524
DNA repair and recombination proteins [BR:
synp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Syn7502_02524
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Syn7502_02524
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Syn7502_02524
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
AFY74496
UniProt:
K9SX34
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All DBs
Position
complement(2498175..2500292)
Genome browser
AA seq
705 aa
AA seq
DB search
MKELPILNSNSWQIFPLVEPKPWLIERVGNYAAQLLWQRGLQTESEIQAFLNPSAYTPTG
AFAFGEEMIWAIERIKAAREQRHKVAIWGDFDADGITATSVLWDGLGQFFPQGEQLIYFI
PNRLTASHGLSVSGIDTLRDCQLIITCDTGSTNLKEIDYLRSLEIDVIITDHHTLPEHRP
PVTAIINPRYLSSDHPLFHLSGVAVAYKLIEALYETMPHIPTQPVESLLDLVAIGLVADL
VQLSGDCRYLAQKGIEELKKKNRLGVKFLLEACKKEGDRPTDISFGIAPRINSISRIWGD
VHKCVEMLTSSDPIQCQALVDLAEEANNQRKALQKKIYNQVLERIINIDLSTSPILVLAD
ANWHGGILGVVAGQIAQEYNRPVILLNIDGDTLRGSARSPQGIDLYSLIKGQEHILTSFG
GHPYAAGLSLSIQNLELFKESLIQKFWQQYGTISPKAIAIDLVVTIAELGQELFRELKQL
EPHGMGNPAPKLLIKNCRFTNKFNANIKNRRGQKLQYLKSEFKLVDATGSINGHWWEQSI
DQVPDHPCDVVLELVDNPRTRTYEVRIIDVAPLADSLPETETYNQIIKLEPFVTKAGLKL
SPNLQGEDLWQRLVGVAKYLSRTGQTVTYTQLQNKLGINMPILQLGLKALEVYGWQIQEN
SEDLRINFPQRQTYPDYNQVPPEVEYFVKFVNEAAFRQSFAPSQV
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaactccctatactgaactcaaactcttggcaaatttttccgttagtggagcct
aaaccttggctcatagaaagagttggaaattatgcagcgcaacttttatggcaaagggga
ttacaaacggaatctgaaatccaagcatttctcaatcctagtgcttatacgcccaccggt
gcctttgcttttggagaagaaatgatatgggcgattgagagaattaaagcagcaagggaa
caacgacataaagttgctatttggggagattttgatgcggatggaattactgccacatca
gttttatgggacggtttaggacagttttttccccaaggtgaacaattaatttattttatt
cctaatcgcttaactgcatcccacggtttatctgtttcgggcatagatacgctccgagat
tgtcagttaattatcacctgtgacacgggcagcactaacctcaaagaaattgattacctg
cgatcgcttgaaatagacgtaattattaccgatcaccacaccctacccgaacaccgtccg
cctgtgaccgccattatcaatcctcgctacttaagttccgatcatcccctcttccatctt
tcgggcgtggcagttgcctataaactgatcgaggcactgtacgaaactatgccccatatt
cccacccaacccgtagaaagtttattagatttagtagcaatcggtttagttgcagacctc
gtgcagttaagtggtgattgtcggtatttggctcaaaagggtattgaggaactaaagaag
aaaaatcgtttaggagttaaatttttattagaagcttgtaaaaaagaaggcgatcgcccc
acagatattagttttggtattgcccctcggattaattccatcagtcgaatttggggagat
gtgcataaatgcgtggaaatgctgactagttccgatcctattcaatgtcaagccctagtt
gacctagcagaagaagctaataaccaaagaaaggcattgcaaaagaaaatatataaccaa
gtgctagagagaattatcaacattgatctttccacctcaccgattttagttttagcagat
gcaaattggcatggaggtattttgggcgtagtagcgggacaaatcgctcaggaatataat
cgtccagtgattctcttaaatattgatggcgatacacttagaggcagtgcacgatcgcct
caagggatagatttatatagtctgattaaaggacaggaacatattttaactagctttggt
ggacatccctatgcggcggggttgagcttatcgatccagaacttagagttatttaaagag
tctttaattcaaaaattttggcagcagtacgggactatttctcctaaggcgatcgccatt
gatttagtagttactattgctgagcttggacaggaattatttcgagaacttaaacagctt
gaacctcacggtatgggtaatcctgcccctaaattactaataaaaaattgccgcttcacc
aataaatttaatgccaatattaaaaatcgccgtgggcagaaactccagtatctgaaatcc
gaatttaagttggtggatgcaactggctccataaatgggcattggtgggagcagtccatt
gatcaagtgcccgatcacccctgtgatgtggttttagaactagtagataatccccgtacc
cgcacctacgaagtccgcattattgatgttgctcccttagcagattctttaccagagact
gaaacctataatcaaattattaaactggaaccgtttgtaaccaaagcaggattaaaatta
agccccaatcttcagggggaagacctgtggcaacgtctagtcggggttgctaaatatctc
agccgcacgggacaaaccgtcacctatactcaactccaaaataagcttggtattaacatg
ccgatcttgcagttaggactaaaagctttagaggtatatggttggcagattcaagaaaat
tccgaagatttacggattaattttccccaaagacaaacctaccctgactacaatcaagtt
ccaccagaggttgagtattttgtcaaatttgtgaacgaagctgcatttcgtcaatccttt
gccccatctcaagtttaa
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