Synechococcus sp. PCC 7502: Syn7502_02897
Help
Entry
Syn7502_02897 CDS
T02371
Name
(GenBank) 23S rRNA (uracil-5-)-methyltransferase RumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
synp
Synechococcus sp. PCC 7502
Brite
KEGG Orthology (KO) [BR:
synp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
synp03009
]
Syn7502_02897
Enzymes [BR:
synp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Syn7502_02897
Ribosome biogenesis [BR:
synp03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Syn7502_02897
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Cons_hypoth95
TRAM
Methyltransf_31
TRM5-TYW2_MTfase
RrnaAD
Methyltransf_25
Methyltransf_15
MTS
DOT1
PrmA
Methyltransf_11
Methyltransf_32
PCMT
TRM
Motif
Other DBs
NCBI-ProteinID:
AFY74825
UniProt:
K9SXE8
LinkDB
All DBs
Position
complement(2844601..2845971)
Genome browser
AA seq
456 aa
AA seq
DB search
MQQDQIISLEITDLSDSGDGVGRYQDLAIFVADTVPGDRIEAKLTFVKPNLAHARLEKIL
SPSPHRVRSSCIVADKCGGCQWQVVSYEYQLEAKQNQVVQALQRIGGFSPTEISSVISEI
IPAPDPLQYRNKVSYPLAMDNSKNEHRLKIGYYQKRSHKIVNINQCPVQDQRLDPFLAGL
KRDIRKREWQIYDENTHRGLLRHISLRIGRNTGEILLTLVAKDWEVPKLELQAPLWLEAY
PNLVGVMLNRNGDRTNTILGEETRCIAGRDYIEEIFAGLRFQLRADTFFQVYTEQAEALV
NLIQRELQLQKTDVIVDAYSGVGTLTLPLSKKVKQAIALEIQPQATIQAEQNAKLNGIRN
VRFHTGTVEELLPQLDLKPDVILLDPPRKGCHPEAIAYLCQSEIPRLVYVSCNPATLARD
LRSLVREGSYKITKLQPLDFFPQTAHVETVAFLTKV
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaggatcaaatcatctcccttgaaatcactgacctatccgatagtggagatgga
gttggtcgttaccaagatctagctatttttgtcgctgatactgtaccaggtgatcgcatt
gaagcaaaactgacctttgttaaacctaatttggcacatgctcgtctggaaaaaatttta
tccccatccccccatcgtgtgcgttctagctgtattgttgccgataaatgtggcggttgt
cagtggcaggtagttagttatgaatatcaactagaagcaaagcaaaatcaagtagtacag
gcattacaaagaattggtggattttcacctacggaaattagttctgtaatttctgagatt
attcctgctcccgatcctttgcaatatcgcaataaggtgtcctatcccctagcaatggac
aatagtaaaaatgaacatagattaaaaattggctattatcaaaagcgcagtcacaaaatt
gtcaatatcaatcaatgtcctgtgcaagatcaacgcctagacccatttctagcgggacta
aaacgagatattcgtaagcgagagtggcaaatctatgatgagaatacccaccgaggtctt
ttacggcacattagccttcgcattggcagaaatacgggggaaattcttttaactttagtt
gccaaggactgggaagttcctaagctagaactacaggctcctctatggcttgaggcatat
cctaatcttgtgggtgtgatgttaaatcgtaatggcgatcgcacaaatacaatcttagga
gaagaaacccgttgtattgccggacgggattatattgaggaaatatttgcaggtttaaga
tttcaattacgggcagatacgttttttcaagtttatacggaacaggcagaggctctggtt
aatttaatccaaagggaattacaactccaaaaaaccgatgtgattgttgacgcttactca
ggtgtgggaactttaaccctacccctatctaaaaaagttaaacaggcgatcgcccttgaa
attcaaccacaggcaacaatccaagctgaacaaaatgccaaactgaatggaattcgtaat
gttagatttcatacaggcaccgtagaagagttactaccgcaattggacttaaagcccgat
gtgattctcttagacccaccacgcaaaggctgtcaccctgaagcgatcgcctatctatgt
caatcagaaattccccgtttagtttatgtcagttgtaaccctgcgaccctagctagggat
ttacgcagtttagtgagggagggcagttataaaattactaagctacagcccctagacttt
tttccccagactgcccatgtggaaacggtggcatttttaactaaggtttaa
DBGET
integrated database retrieval system
