Synechococcus sp. PCC 7502: Syn7502_03470
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Entry
Syn7502_03470 CDS
T02371
Name
(GenBank) RNA polymerase sigma factor, cyanobacterial RpoD-like family
KO
K03086
RNA polymerase primary sigma factor
Organism
synp
Synechococcus sp. PCC 7502
Brite
KEGG Orthology (KO) [BR:
synp00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Syn7502_03470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
synp03021
]
Syn7502_03470
Transcription machinery [BR:
synp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Syn7502_03470
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
UPF0154
Motif
Other DBs
NCBI-ProteinID:
AFY75318
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Position
complement(3401393..3402574)
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AA seq
393 aa
AA seq
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MTTATDLLTEILVPNQSSSRIRQIAEPSLMDLASLDKDDDLDEIDETLDPAVEGEGGKVT
KARRGRKATAQTKKKHYTEDSIRLYLQEIGRIRLLRADEEIELARKIADLLQLEDKQREL
AEQHDCDLEDVNLEDWAVEMDMPLDKFKNRLHSGRRAKDKMVQSNLRLVVSIAKKYMNRG
LSFQDLIQEGSLGLIRAAEKFDHEKGYKFSTYATWWIRQAITRAIADQSRTIRLPVHLYE
TISRIKKTTKLLSQEMGRKPSEEEIATRMEMTIEKLRFIAKSAQLPISLETPIGKEEDSR
LGDFIESDGETPDDQVAKNLLREDLESVLGTLSPRERDVLRLRYGLDDGRMKTLEEIGQI
FNVTRERIRQIEAKALRKLRHPNRNSVLKEYIR
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgaccacagccactgacctactcacggaaattctggtgcctaatcaatcatccagcaga
atcagacaaatagcagagcctagcctaatggacttggcatccctagataaagatgatgac
ctagatgaaattgatgaaaccctagaccctgctgtggaaggagaaggtggaaaagttaca
aaggctcggcggggacgtaaagctactgcccaaactaagaaaaagcactataccgaagat
tccattcgcctatatttacaggaaattgggcggattcgactgctgagagccgatgaagaa
attgaacttgctcgtaaaattgctgatcttttacaactggaagataaacagagagaactg
gcggaacaacatgattgtgaccttgaggatgtaaatttggaagactgggcagtcgaaatg
gatatgcccttggacaagtttaaaaatcgtctgcattctggtcgccgtgccaaggacaaa
atggtgcagtctaatttgcggctagtggtttcgatcgctaaaaaatatatgaaccgaggc
ttatcctttcaagacttaattcaagaaggtagcttaggcttaattcgcgccgccgaaaaa
tttgatcatgaaaagggatataaattttctacctacgctacatggtggattcgccaagca
attacccgagcgatcgccgatcaatctcgtaccattcgtctgcctgttcacctttacgaa
actatctctcggattaaaaaaactacaaagctgctctctcaagaaatgggacgtaagccc
agtgaagaagaaattgccactcgaatggaaatgaccattgagaagttaagatttattgca
aaatcggctcaactacccatctctttagaaaccccaattggaaaagaagaagattcacgt
ttaggtgattttattgaatctgatggagaaactcccgatgatcaagttgccaagaattta
ctgcgtgaagacctagaaagcgtattaggaaccctcagccctagggaaagagatgtattg
agattgcgttacggattggatgatggacgcatgaaaacccttgaagaaattggacaaatc
tttaatgttacccgtgagcgtattcgccaaattgaagcaaaagcacttcgtaaattacgc
catcccaatcggaatagtgtccttaaagaatatatccgttag
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