Synechococcus sp. KORDI-49: KR49_03110
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Entry
KR49_03110 CDS
T03345
Name
(GenBank) hypothetical protein
KO
K03550
holliday junction DNA helicase RuvA
Organism
synr
Synechococcus sp. KORDI-49
Pathway
synr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
synr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KR49_03110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
synr03400
]
KR49_03110
DNA repair and recombination proteins [BR:
synr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KR49_03110
RecFOR pathway proteins
KR49_03110
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HHH_5
RuvA_N
RuvA_C
HHH
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AII45452
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Position
501713..502351
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AA seq
212 aa
AA seq
DB search
MLGWLSGTILATYQRGNRHLIVLRCGSVGYEVNVIQRDWNDITQHEERAYWIHQVCQNDD
TILYGFQSLSTRELFRTLISVNGVGPQVGLALLQECSVEDLVDAIIDADLSLLSQAQGVG
RRTAERITVELRSTLENQRASFQESEPVKGQESKGERAVQDGVPGDLVNTLNVLGYENSE
IRAAIRAVKDTLPPGTGEDAWLRACLKQLSLQ
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgctcggctggttgagcggaacgattcttgcgacgtatcagcgaggcaatcgtcatctc
attgttttgagatgtggatctgtcggctacgaagtcaatgttatccagcgtgattggaac
gacatcacacaacacgaagagcgtgcttactggattcaccaggtttgccagaacgacgac
acaatcctgtatggattccagtctctgagcacgcgcgaactgttccgcaccctgatcagt
gtgaacggtgtggggccccaggtgggactggccctgcttcaggaatgcagtgttgaagat
cttgtcgatgccatcatcgatgccgatctcagcctgttgagccaagcccagggggtgggc
cggcgcaccgcggagcggatcacggtcgagctgcgctcgactctggaaaaccagcgtgca
tccttccaggaatcggagcccgtgaaaggccaggagtccaagggagagagagccgttcag
gacggcgtcccgggggatctggtcaacaccctcaacgtgctgggttacgagaattccgag
atccgtgcggcgatccgcgccgtgaaggacacgcttccccccgggacaggggaggacgcc
tggttgcgggcatgcctgaagcagttaagcctccagtga
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