Synechococcus sp. KORDI-49: KR49_03215
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Entry
KR49_03215 CDS
T03345
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
synr
Synechococcus sp. KORDI-49
Pathway
synr03030
DNA replication
synr03430
Mismatch repair
synr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
synr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KR49_03215
03430 Mismatch repair
KR49_03215
03440 Homologous recombination
KR49_03215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
synr03032
]
KR49_03215
03400 DNA repair and recombination proteins [BR:
synr03400
]
KR49_03215
Enzymes [BR:
synr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KR49_03215
DNA replication proteins [BR:
synr03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KR49_03215
DNA repair and recombination proteins [BR:
synr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KR49_03215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AII45470
LinkDB
All DBs
Position
complement(519362..520135)
Genome browser
AA seq
257 aa
AA seq
DB search
MGDLASGQLDLLGGFSDPDPGPAGPTSLLIIDTETTGLDPELDQCLELGVILFSVPSRAV
LAQQSFLLPVESNAAEVINRIPAAVTRLPQPWKEAMRYFQSLLEAADLLVAHNAAFDRQW
FGQGLLPAVSHPWLCTMEDVRWPAERQLRARPSVRDLALAYGIPVWAAHRALTDCIYLAE
VFQRCEDLEQLIAQALEPRRLVRARVSFDDRHLAREAGFRWNDPVKGAWTRRLTRREEAE
LPFAVVPVEVVPDRLSA
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgggagatctcgcctctggtcagctggatctgctcggagggttctccgaccctgatccc
gggcctgcaggaccgacgtctctgctgatcatcgacaccgagacgacgggactggatccg
gagctggatcagtgtctcgagctgggggtgattctgttctcggttccgtcccgggccgtt
ctcgcccagcagtcctttctgctgcccgtggagagcaacgccgccgaggtcatcaatcgc
attcccgcggctgtgacgcgcctgccccagccatggaaggaggcgatgcggtatttccag
agccttctcgaggcagccgatctgctcgtggctcacaacgccgcctttgatcgacagtgg
ttcggccagggtcttcttcccgcggtgtcccatccgtggctctgcaccatggaggatgtg
cgctggcctgccgagcgtcagctccgtgcacgtccgtcggtgcgggatctcgcactcgcc
tacggcattccggtgtgggcggctcaccgggccctgacggactgcatctatctggctgag
gtgtttcagcgctgtgaagatctcgagcagttgatcgcccaagctctggagccgcgacgc
ctggtgcgcgccagggtgtccttcgatgatcgtcatctcgcccgcgaggcagggttccgc
tggaatgatccggtgaagggtgcctggacccgcaggctcacccgtcgtgaagaggccgag
cttcctttcgctgtcgtgccggtggaggtcgttccagaccgcctgtctgcctga
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