Synechococcus sp. KORDI-49: KR49_03555
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Entry
KR49_03555 CDS
T03345
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
synr
Synechococcus sp. KORDI-49
Pathway
synr00300
Lysine biosynthesis
synr00470
D-Amino acid metabolism
synr01100
Metabolic pathways
synr01110
Biosynthesis of secondary metabolites
synr01120
Microbial metabolism in diverse environments
synr01230
Biosynthesis of amino acids
Module
synr_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
synr00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KR49_03555
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KR49_03555
Enzymes [BR:
synr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
KR49_03555
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AII45536
UniProt:
A0A076H853
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All DBs
Position
584068..585447
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AA seq
459 aa
AA seq
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MTQTIASTRPYEAARDPSSPNRNLAPLTTELDDQDRLLVGGCLLSELAQRYGTPLYVLDE
VTLRSTCRAYRDALQRHYPGESLPVYASKANSSLLMSSIAAAEGLGLDAVSAGELLTALQ
GGMPGRRMVLHGNNKSDEELLLAYDNDVTIVVDNQHDLERLEQLVPAGGEPARLMLRFTP
GIECHTHEYIRTGHLDSKFGFDPDLLESVLKQLVGQPWARLTGLHAHIGSQIFELEPHRD
LAAVMADALGLARRLGHPVTDLNVGGGLGIRYVETDDPPSIDHWVKVVAEGVTAACRERD
LELPRLMCEPGRSLVATAGITLYSVGSRKTIPGVRTYVAIDGGMSDNPRPITYQSLYTCC
LADRPLAEATETVNLVGKHCESGDVLLKDLNLPTTSSGDIVAVFATGAYNASMSSNYNRI
PRPAAVVVNDGAAELVQKREQPDDLLRYDVLPERFRAVR
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
ttgactcagaccatcgccagcacaaggccctacgaagcggcccgggatccgagcagcccc
aaccgcaatctcgcgcccctcaccacggagctggatgaccaggacaggcttctcgttggc
ggctgcctgctgagcgaactggcgcagcgttacgggacaccgctgtatgtcctcgatgag
gtgaccctgcgcagcacctgccgcgcctaccgggacgcccttcaacggcactacccggga
gagtcgctgccggtctacgcctccaaggccaacagctctctgctgatgagcagcatcgct
gcggccgaggggctgggactggacgccgtctccgccggtgagctgctcacggcgctccag
gggggcatgcccggtcggcggatggtgctgcatggcaacaacaagagcgatgaggaactg
ctgctcgcctacgacaacgacgtgacgatcgtggtggacaaccagcacgacctcgagcgg
ctggagcagctggtgccagcaggcggcgaaccggcacgcctgatgctgcgcttcaccccg
ggcatcgagtgccacacgcacgaatacatccgcaccggacatctggacagcaagttcggc
ttcgatccagacctgctggagtcggtgctgaagcaactggtcggacaaccctgggcgcga
ctgaccggtctgcatgcccacatcggatctcagatcttcgagcttgagccccatcgcgac
ctggccgcggtgatggcggatgccctcggcctggcccggcggctcggccacccggtgacc
gatctcaacgtggggggtggccttggaatccgctatgtggaaaccgatgacccgccgagc
atcgaccactgggtgaaggtggtggcggagggcgttaccgcggcatgccgagaaagggat
ctggagcttccccgtctgatgtgcgaaccggggcggtctctggtcgccacggcaggcatc
acgctttacagcgtggggtctcgcaagacgatcccgggagtgcgcacctacgtcgccatc
gacggtggcatgagcgacaacccacggccgatcacctaccagtctctctacacctgctgc
ctggcggaccggcccctggcggaagccactgaaacggtgaacctggtgggcaagcactgt
gagtcgggcgacgtgctgctcaaggacctcaatctgccgaccaccagcagtggcgacatc
gtcgcggtgttcgccaccggtgcctacaacgcgtcgatgagctccaactacaaccgcatc
ccccgcccggctgcggtggtggtgaatgacggagcggctgagctggttcagaagcgcgag
cagccggatgacctgctgcgctacgacgtgctgccggagcgcttccgagcggtacgttga
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