Synechococcus sp. KORDI-49: KR49_03690
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Entry
KR49_03690 CDS
T03345
Name
(GenBank) hypothetical protein
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
synr
Synechococcus sp. KORDI-49
Pathway
synr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
synr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KR49_03690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
synr03400
]
KR49_03690
Enzymes [BR:
synr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KR49_03690
DNA repair and recombination proteins [BR:
synr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KR49_03690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
AAA_22
UvrD-helicase
Helicase_RecD
PhoH
AAA_16
SLFN-g3_helicase
UvrD_C
TrwB_AAD_bind
DUF4350
AAA
nSTAND3
PIF1
AAA_28
Motif
Other DBs
NCBI-ProteinID:
AII45562
UniProt:
A0A076H9V2
LinkDB
All DBs
Position
complement(605613..607175)
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AA seq
520 aa
AA seq
DB search
MTGSNWPAGFAAAVHAVLVRHRPPSETDAALEQLSTDLVAALEQGELSLPLTAERRAVAR
SSGWLTGEAAPLMVEGERIGWRRWLTAMQAVVDQLLERASRPVPVSRSGALPDLPRGLNH
EQRQAVLAPDHLSVVLLSGGPGTGKTSTVVEMLQRARARHPDLRIGLAAPTGKASRRLAD
AVRPRCPDLPCSTLHRWLEASSAGFRRNRSRPLELDLLVIDEMSMLDLALMQALLEALPS
GCRLILVGDPAQLPPVGSGAVWHRLQDPDVRDRFGPAAVQLMHVYRNRGALAQLASRLRE
DGLEGFAQELDGLPPAANVLHRREPLQRLPLALRKSWPSRLERLAQLASGLEMMQEADLE
EASQPLLRELEHDLVLCPRRQGRWSLEDVHRTLLGAAGVQDPWSWPVGLPVICGSNQPEL
GLANGDLGVKLGLGEGSCLLFRVLGADGSVVVRRLHPARLQRVEPAVALTIHRAQGSEAD
GVTVLWPHSLQSDPLDRHASRLLYTAITRARDTLELITPD
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
gtgaccggaagcaactggcccgccggtttcgccgcagcagtgcatgcggtgctggtgcgg
catcgaccgccgtccgagacggatgccgctctcgaacagctcagtaccgatctcgtggcg
gctcttgagcaaggcgagctttcactgccgctgacggcggagcgccgggcagtggcgcga
tccagcggctggctgactggcgaggcggcgccgctgatggtggagggggagcggatcggc
tggcgccgctggctcacagcgatgcaggcggtggtggatcagctgttggagcgggcttcc
aggcctgtgcctgtctcccgctccggtgcgcttccggatctgccgcggggcctgaatcat
gagcagcgccaggcggtgctggcaccggatcacctgtctgtggtgctgctcagtggtgga
cccggcaccggcaagaccagcaccgtggtggagatgctgcaacgggcgagggcccgccat
ccggatctgcgcatcggcctggccgcgcccaccggaaaggcatcgcgccgtctggcggat
gccgttcgcccccgatgtcctgatctcccatgcagcacgcttcatcgttggctcgaggct
tccagtgctgggttccgccgcaaccggagccggcctctggagctcgatctcctcgtgatc
gacgagatgtcgatgctggatctggcgttgatgcaggctctgttggaggctcttccctcc
ggctgccgcctgatcctggtgggagatccggcacaactgccgccggtgggcagcggtgcg
gtctggcatcggcttcaggaccctgacgtgcgggaccgcttcgggcctgctgcggtgcaa
ctaatgcacgtctaccgcaatcgcggcgcccttgctcagctggccagcaggcttcgcgag
gacggtctggagggattcgcgcaggaactggatggattgccgccggcagcgaacgtgctg
catcgacgggaacctctgcagcgactgccgttggcgctgcggaagagctggccctcgcgt
ttggagcgtctggctcagctggcatcaggcctcgagatgatgcaggaggccgatctggag
gaggcgtcccagccattgctcagggagctcgagcacgatctggtgctctgtcccagacgc
caggggcgctggagccttgaggatgttcatcgcaccctgctgggagcggccggcgtccag
gacccctggagttggccggtcggtctaccggtgatctgcggcagcaatcagccggaactt
gggctcgccaacggcgatctcggcgtcaagctcgggcttggagagggctcctgtctgctg
ttccgtgtgctgggcgcagacggcagcgtcgtggtgaggcggctgcatccggcccggctg
cagcgagtggagccggcggtggcgctcaccatccaccgagcacagggcagtgaggcggat
ggcgtcacggtgctttggccgcattcgctgcagtccgatcccctggaccgtcacgccagc
cggctgctttacacggccatcacgcgtgcgcgtgacacccttgagttgatcactccggac
tga
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