Synechococcus sp. KORDI-49: KR49_03695
Help
Entry
KR49_03695 CDS
T03345
Name
(GenBank) hypothetical protein
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
synr
Synechococcus sp. KORDI-49
Pathway
synr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
synr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KR49_03695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
synr03400
]
KR49_03695
Enzymes [BR:
synr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KR49_03695
DNA repair and recombination proteins [BR:
synr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KR49_03695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_25
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
AII45563
UniProt:
A0A076H8S4
LinkDB
All DBs
Position
complement(607172..610756)
Genome browser
AA seq
1194 aa
AA seq
DB search
MVQRFEANSYPLVPGLRLLEASAGTGKTFALAHLCLRLITEAQHPLEQLLVVTYTEAAAD
ELRSRIGQRFQAALEGLEALETEAAPPAADPVLENWLEHAADTTLRRQWISCLLLALEQL
DRADITTIHGFCRRTLRRMALSSGAAMDPELETDSTDLLQQVVQDIWRDQLLTLPADQLI
GLRQSGLSPEAMVQALRVLDGEPHPCVLAERDDFDPDEPLAAQLQLWMGRCWERFLILWK
RDGESLETRFRSSAAQWKAQGCRDTKPYSGKPRTDRCALLDRWIADQNGIPSLTAIRAQK
GLLRDYFHPGCWCSTARRCGESDPSLAAAELQQVMAALWDGPPERVWRFVLNRALRELAA
RRTRRGVISFPGLLAALDPGEEDAPWLEPLRCRYRAVMVDEFQDTDPLQWRLLRRTFAER
GNHLLLLVGDPKQAIYRFRGGDLDTYLQARRQADRIDALQENFRTTPTLMRALNDLMRPG
LVRSELPVPAVEPRGSAQAPPRGCPLQLLHWCGETPLTKTALVEELPLRLADAVLRLLQE
RDDLTPAQLCLLVSTHRQATELRRALSSRGLPTRLVSQGDVFETEAAVVLQRLLDALAQP
GDERRLRLLACSPLMGWPPDDLSIDGRLDQLALRLRAWAVQMPTIGLLGCLSDLLDGERM
AELSDRGRMLGDLQQAARLVQEVMHRQGLDIASAATWLRRERLHPADPVPEPRQPHSDLV
ESAIAVVTVHRSKGLEYPVVICPTLWEGPRVGGGPLWRDGGEGSWRLLLDSRWGRGLDLA
QQEETAAMAEAERLAYVALTRARSQLVLVWARVTRQEGSPLVSWLFGADAVGQPIDQLTD
ERLSAELAERALAIELTSLEPPDPAPRRWRSPAPTDRLCIGAVPQRIDRRWGRSSYSAWT
ATSEDPARHEQGRDADPEGEEILDEVDDHWPEDGPLRDFPRGASAGDCLHRILEQVSYQP
STPDPELVEAELRRAGLDISWVPAVQQGLRLVVETPLGGPLGDLSLDQLAPEQRHPELGF
DLPVEQVRTADLVKAFQAEPEARFGEDYLERLASLSVNSRGFLTGSIDLVFVDPNLRWWV
LDWKSNWIGERSGDGSDDRCGPRHYTDAAMGLQMIHHHYPLQAHLYLVALHRHLRWRLPG
YLPERHLGGYVYAFLRGMPGSRQPGSRAAPGRIVEPAPLRRVLALDRLLQEGGR
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atggttcagcggtttgaggccaacagctatcccctggtcccagggctgcgcctgctcgag
gccagcgccggaaccggcaagacctttgcgctcgcccatctctgcctgcggctgatcacc
gaagcgcagcatccgctggagcagctgctggtggtcacctacaccgaagctgcggcggac
gagctgcgttcacgcatcggccagcgcttccaggctgccctcgaaggcctggaagcgctc
gagactgaggctgctcctccagctgccgacccggttcttgagaactggttggagcatgcg
gcagacaccacgcttcgcaggcagtggatcagctgcctgcttcttgcgctggaacagctc
gatcgggccgatatcaccacgattcatggcttctgccgccgcacgctgcggcggatggcc
ctcagcagcggggctgccatggatcctgagctggagaccgactccaccgacctgctgcag
caggtggtgcaggacatctggcgtgaccagctgctgacgttgcctgcggatcagctcatt
ggtctgcgccaaagcgggctgtctccggaggcgatggtgcaggccctgcgggttctggac
ggcgagccacatccctgcgttctcgcagaacgggatgacttcgaccccgacgaacccctt
gccgctcagctgcagctctggatggggcgctgctgggagcgttttctcattctctggaag
cgggatggcgaatcgctcgaaacacgcttccgcagcagtgccgctcagtggaaggcccag
ggctgcagggacacaaagccctacagcggcaagccccgcacggatcgttgcgcattgctg
gatcggtggattgccgatcagaacggcattccgtcgctgaccgcgattcgcgcgcagaag
ggacttctgcgcgactacttccaccccggatgctggtgcagtaccgccagacgctgcggc
gagagcgatccctcgctggcggcagcggagctgcagcaggtgatggccgccctctgggac
ggaccacctgagcgggtctggcgctttgttctgaaccgcgcgctccgggagcttgccgcg
aggcggacgcgccgcggtgtgatctcgttccccgggctgctggcggccctggatccggga
gaggaggacgctccatggctggagccgttgcggtgtcgttaccgggccgtgatggtggac
gaattccaggacaccgatcccttgcagtggcgcttgctgcgccggacctttgcggagcgg
gggaatcatctgctgttgctggtcggtgatcccaagcaggccatctaccgattccgaggc
ggcgacctggacacctatctccaggcacgccgtcaggcggaccggattgacgcccttcag
gagaacttccgcaccacaccgactctgatgcgtgccctgaatgatctgatgcgccctgga
ctggtgcgttccgaactgccggtgcctgcggtggagccccgcggcagtgcgcaggctcct
ccgcggggttgcccgctgcagctgcttcattggtgcggagagactccgctcaccaagacg
gcactggtcgaggagctgccactgcgtctggcggatgccgtgctgcggctcctgcaggaa
cgggacgacctgacgcctgcgcagctctgcctgctggtcagcacccaccgtcaggccacg
gagttgcgtcgggctctgtcgagccgaggcctgccgacccgtctcgtgagccagggggat
gtgttcgagacggaagcggccgtggtgcttcagcgcctgctcgatgctctcgcccaaccc
ggggatgagcggcgtctgcggttgctggcctgctcgcccctgatgggatggccgcctgat
gatctgagcatcgacggtcgcctggaccagctcgccctgcggctgcgtgcatgggcggtc
cagatgccgacgatcggtcttctgggatgcctttcggaccttctggatggagagcggatg
gcggagctttccgatcgcggccggatgctcggtgatctgcagcaggcggcccggctggtg
caggaggtgatgcaccgtcagggactcgacatcgccagtgccgcgacctggctgaggcgt
gagcgtctgcaccctgctgatcccgttcctgaaccgcgtcagccccatagcgatctcgtt
gaaagtgcgatcgccgtggtgaccgtgcaccgcagcaaggggctggaatatccggtggtg
atctgcccgacgctctgggaaggcccccgggtcgggggtggtccgctctggcgggacggc
ggggagggttcctggcggttgctgctcgattcccgctggggacgggggctggacctggcg
cagcaggaggagacggcggcgatggctgaggcggaacgcctggcctatgtggcgctcacc
cgtgcacgctcccagttggtgctcgtctgggccagggtcacgcgtcaggagggctctccg
ctcgtgagctggctgttcggtgcggatgccgtgggtcagccgatcgatcagttgacggat
gagcgcctcagtgcggaactggctgagcgagctctggcgatcgagctgaccagcctggaa
ccgccggatccggcaccccgtcgctggcgcagccctgcgccaactgaccgtctctgcatc
ggtgcggttccgcagcgaatcgaccgccgctggggccgctccagctactccgcctggacg
gccacgtcggaggatccggcccgtcatgagcagggtcgcgatgccgatcctgagggtgag
gagatccttgatgaggtcgacgaccactggccggaggatggcccgctccgtgatttcccg
cggggtgcctctgccggggactgcctgcatcgcattcttgagcaggtgtcgtatcagccc
tccacaccggatccggagctggtcgaggcggagctccgccgcgcggggctcgacatcagc
tgggtcccggcggtgcagcagggtctccgcctggtggtcgagaccccgctcggtggtccc
ctcggcgatctgagcctcgatcagctcgccccggagcagcgacaccccgaactcggattc
gacctgccggttgagcaggtgcgcacggctgatctggtcaaggcctttcaggccgagcct
gaggcccgtttcggggaggactatctcgaacggctggcgagcctctcggtgaacagccgc
gggtttctgaccggatcgatcgatttggtgtttgtggatcccaacctgcgctggtgggtc
ttggactggaaaagcaactggatcggcgaacgctccggtgatggctcagacgaccgctgc
ggtccgcgtcattacaccgatgcggccatgggcctgcagatgatccatcaccactacccg
ctgcaggctcatctgtatctggtggctctgcatcgccatctgcgctggcgcctccccggc
tatttgcctgaacgtcatctgggtggttacgtctacgccttcctgcgcgggatgcccggt
tcccgtcagcccggctcgcgtgccgctccggggcggatcgtcgagccggctccactgagg
cgggtgctggctctcgaccggttgctgcaggaggggggacggtga
DBGET
integrated database retrieval system
