Synechococcus sp. KORDI-49: KR49_06060
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Entry
KR49_06060 CDS
T03345
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
synr
Synechococcus sp. KORDI-49
Brite
KEGG Orthology (KO) [BR:
synr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
synr03016
]
KR49_06060
Enzymes [BR:
synr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
KR49_06060
Transfer RNA biogenesis [BR:
synr03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
KR49_06060
Prokaryotic type
KR49_06060
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GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
AII46016
UniProt:
A0A076H9B5
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Position
1026599..1027465
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AA seq
288 aa
AA seq
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MWLFDCGEGTQHQFLRSDLRLSQLRRVFITHMHGDHVFGLPGLLASLGLSGSCNEGVDLY
GPDPLETFLQGALSSSSTRIGYPLQIHRVRPAAEQGTLVFEDDALTVRCTPLTHRVPAYA
YRVEQKPLAGRFDIERARALGIPPGPVYARLKRGETVTLEDGRVMDGTSLCGPDRPGVSV
VYCTDTVFCEAAVELARGADLLIHESTFAHAEAEMAFQKQHSTSTMAAQTAAEAGVGQLV
LTHLSPRYAHGNPVTPDDLLAEARAIFPETLVAKDFMTLDVKPRCNSS
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgtggctgttcgactgcggtgagggcacccagcaccagttcctgcgcagtgacctgcgg
ctctcccagctgcgccgggtgttcatcacccacatgcacggggatcacgtgttcggcctg
cctggcctgctggccagcctcgggctgtcgggcagctgcaacgagggagtcgacctctac
ggccccgatcccctggagacctttcttcagggggccctcagcagcagctccacccgcatc
ggctatccgctccagattcaccgggtgcgcccggcggctgagcagggaaccctcgtgttc
gaagacgacgccctgacggtgcgctgcacaccgctcacccacagggtgccggcctatgcc
taccgggtcgagcagaagccactcgccggccgtttcgacatcgaacgggcccgtgccctg
gggattcctcccggcccggtctacgcgcggctcaaacggggtgagaccgtcaccctcgag
gacggtcgggtgatggacggcaccagcctctgcggcccggaccgccctggggtgagcgtt
gtgtactgcaccgacaccgtcttctgtgaggccgccgtggagctggcccgcggcgccgat
ctgctgatccatgaatcgaccttcgcccacgccgaagcggagatggcctttcagaaacag
cactccaccagcacgatggccgcccagaccgcggcagaggctggggtcggccagctggtg
ctgacccacctgagtccccgctacgcccatggcaatccggtcacaccggacgacctgctg
gcggaggcgagggcgatcttcccggagaccctggtcgccaaggatttcatgaccctggac
gtgaagccccgctgcaacagttcgtga
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