Synechococcus sp. KORDI-49: KR49_08750
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Entry
KR49_08750 CDS
T03345
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
synr
Synechococcus sp. KORDI-49
Brite
KEGG Orthology (KO) [BR:
synr00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KR49_08750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
synr03021
]
KR49_08750
Transcription machinery [BR:
synr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KR49_08750
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
AII46532
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Position
1576491..1577273
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AA seq
260 aa
AA seq
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MKQLQELAEDELTARQRHRIRMGKRARDRMMAANLRLVVSVAKKYQNQGLELLDLVQEGA
IGLERAVDKFDPAMGYKFSTYAYWWIRQGMTRAIDNSARTIRLPIHISEKLSKMRRISRE
LSHRFGRQPNRLELAHAMGIEPRELEDLISQSAPCASLDAHARGEEDRSTLGELIADPNG
DEPMEGMDRSIQKEHLGGWLSQLNEREQKILRLRFGLGGEEPLTLAEIGRQINVSRERVR
QLEAKAILKLRTMTNHQQAA
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagcttcaagagcttgctgaagacgaactgacagctcgacagcgccatcgcatc
cgaatgggcaaacgtgcccgagaccgcatgatggctgccaatctcaggctcgtcgtgagc
gtcgccaagaaataccagaatcagggcctggagcttctggacctggttcaggagggagcc
atcggcctggagcgcgcggtcgacaagttcgatccggccatgggttacaaattttccacc
tacgcctactggtggatccgtcagggaatgacccgggccatcgacaacagtgcccgcacc
attcgtctgccgattcacatcagcgagaagctttccaaaatgcggcgcatctcccgtgag
ctgtcgcatcgcttcggtcgtcaaccgaaccgtctggagctggctcacgccatgggaatc
gaacctcgggagctcgaggatctcatttcccagagtgctccgtgcgcctctctcgatgcc
catgcccgcggggaagaggatcgcagcacccttggcgaactgatcgcagatccgaacggt
gatgagccgatggaaggaatggatcggagcattcaaaaggaacatctgggcggttggcta
tcccagctcaatgagcgcgaacagaagatcctgcgcctgaggttcggcctcggtggtgaa
gagccactcacccttgcggagatcggtcgacagatcaatgtttcccgggaaagagtgcgt
cagctggaagccaaagcgattctcaaactgagaaccatgaccaaccaccagcaagcagcc
tga
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