Synechococcus sp. KORDI-49: KR49_09870
Help
Entry
KR49_09870 CDS
T03345
Name
(GenBank) ATPase AAA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
synr
Synechococcus sp. KORDI-49
Pathway
synr03420
Nucleotide excision repair
synr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
synr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KR49_09870
03430 Mismatch repair
KR49_09870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
synr03400
]
KR49_09870
Enzymes [BR:
synr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KR49_09870
DNA repair and recombination proteins [BR:
synr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KR49_09870
MMR (mismatch excision repair)
Other MMR factors
KR49_09870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
DEAD
ResIII
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AII46746
LinkDB
All DBs
Position
1804024..1806417
Genome browser
AA seq
797 aa
AA seq
DB search
MSFLAGLNDAQRRAVDHHEGPLLVVAGAGSGKTRALTHRIAHLIGAHGVDPAQVLAVTFT
NKAAREMKERLELLLAQRLAQSQFGQPWSTLPPVEQRQLRSRIYREVTKELWIGTFHALF
ARMLRFDIDKFKDSEGLTWTRQFSIYDEADAQSLVKEIVTQELQLDPKRFEPKKTRWAIS
NAKNQGWLPDQLEAHAEGQRGKLTADVYRRYRKALAANNALDFDDLLLLPVQLLQQNEQV
RSYWHRRFRHVLVDEYQDTNRTQYDLIKLLVTDGRDPQSVEDWSGRSVFVVGDADQSIYS
FRAADFTILMGFQDDFGDQAPDDTTHTMVKLEENYRSTATILEAANALISNNSERIDKVL
RPTRGEGELITLTRCDDEIAEAEAVVHRIRMMEAANPELSWGDMAVLYRTNAQSRAIEES
LVRWGIPYIVVGGLRFYDRREIKDLLAYLRLLVNPADTVSLLRVINVPKRGIGKTTIQRL
TDAANQLGIPLWDVVSDAEAVRSLGGRSAKGLLQFCELLNDLRLRVQDAAPSELIQQVME
KSGYVAELITEATDEAEERRRNLQELVNAALQYQEENDEGDLEGFLATAALSSDADSKDT
AADRVTLMTLHSSKGLEFPVVFLVGLEQGLFPSYRSLDDPASLEEERRLCYVGITRAKER
LFLSHASERRLWGGMREAAVPSVFLSELPEALIQGDIPQSGGAALRRERRLERLTRVDRD
PPASAPANAVRRRQAGPAPGRSWCVGDRVSHASFGIGEVTHTFGSGEKVSIAVKFAGMGP
KILDPRLAPIEPVSGTD
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgagctttcttgcaggactcaacgacgcccagcgacgggcggtggatcaccacgaaggg
cccttactggttgtggctggagccggaagcggcaagacccgtgcgctgacccatcgcatc
gcgcatctgatcggtgcccacggagtggatccagctcaggttctcgcggtcaccttcacc
aacaaggcggcacgggagatgaaggagcggttggagctgttgctggctcagcggctggct
cagagtcagttcggtcagccatggagcacgctgccgccggtggagcagcgtcagctgcgc
tcgcgtatctaccgggaggtcaccaaggagctctggatcggcacctttcacgcgctcttc
gcgcggatgcttcgcttcgacatcgacaagttcaaggacagtgaggggctcacctggacc
cgtcagttctcgatctacgacgaggctgatgctcagagcctggtgaaggagatcgtcacc
caggagctgcaactggatcccaagcgttttgagccgaagaagacccgatgggccatcagt
aacgccaagaatcagggctggcttcccgatcagctggaggcccatgcggaagggcagcgc
ggcaagctcaccgcggacgtgtaccggcgttatcgaaaggctctggcggccaacaacgcc
cttgactttgatgatctgctgttgcttccggtgcagctgctccagcagaacgaacaggtg
cgcagctactggcaccgccgcttcagacatgtgctggtggatgaataccaggacaccaac
cgcacccagtacgacctgatcaagctgctggtgaccgacgggcgggatccgcagagcgtg
gaggactggagcggacgctccgtgttcgtggtgggagatgccgatcagagcatctacagc
ttccgggctgctgatttcacgattctgatgggcttccaggacgatttcggcgatcaagct
ccggatgacaccacgcacacgatggtgaagctggaggagaactaccgctccactgccacg
atcctggaggcggccaatgccctgatttctaataacagcgaacgcatcgacaaggtgttg
cgccccacccggggcgagggcgaattgatcaccctcacgcgttgtgacgacgagatcgcc
gaagccgaggccgtggtgcaccggattcggatgatggaggctgcgaatcccgaactcagc
tggggagacatggcggtgctttatcgcaccaatgcccagtcgcgtgcgatcgaggaatcc
ctggtgcgctggggcatcccttacatcgtggtgggtggtctgcgtttctatgaccggcga
gagatcaaggaccttctggcctatctccgactgttggtgaatccggcggacaccgtcagc
ctgctgcgcgtgatcaatgtgccgaagcgcggcatcggcaagaccacgatccaacgcctc
accgatgctgccaatcagctggggattcccctttgggatgtggtgagcgatgccgaagcg
gttcgctccctgggtggccgttcagccaaggggttgctgcagttctgcgaactgctcaat
gatctgcggctgcgggtgcaggacgctgctccgtccgagctgattcagcaggtgatggag
aagagcgggtacgtcgctgaattgatcacagaagccaccgatgaggcggaggaacgacgc
cgcaaccttcaggaactggtgaatgcggcgctgcagtatcaggaagagaacgatgagggc
gacctggagggttttctggccaccgccgctctctccagtgatgcggacagcaaggacacc
gcggcggatcgggtcaccctgatgaccctgcacagcagcaagggcctggaatttcccgtg
gtcttcctggtggggctggaacaggggctgttccccagttaccgatcgctcgatgatccc
gcttctcttgaagaggagcggcgtctctgttacgtgggcatcacccgggccaaggagcgg
ctgtttctttcccacgccagtgaacggcggctctggggtgggatgcgggaggccgcagtg
ccgtcggtttttctctcggagctgccggaagcgctgattcagggagatattccccagtca
ggaggtgccgcgctgcggcgggaacgccggttggagcggcttacccgggttgatcgggat
ccaccggcctccgctccagccaatgcggtgcgccgccgtcaggccggtccagcccctggc
cgcagctggtgtgtgggcgaccgggtcagccatgccagcttcggaatcggtgaggtcacc
cacaccttcggcagtggtgaaaaggtctcgatcgccgtgaagttcgctgggatgggaccc
aagatcctggatccgcggttggctccgatcgaacctgtttcaggcaccgattaa
DBGET
integrated database retrieval system
