Synechococcus sp. KORDI-49: KR49_09920
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Entry
KR49_09920 CDS
T03345
Name
(GenBank) peptidase C39
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
synr
Synechococcus sp. KORDI-49
Pathway
synr02010
ABC transporters
synr03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
synr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
KR49_09920
03070 Bacterial secretion system
KR49_09920
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
synr02000
]
KR49_09920
02044 Secretion system [BR:
synr02044
]
KR49_09920
Transporters [BR:
synr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
KR49_09920
Secretion system [BR:
synr02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
KR49_09920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
cNMP_binding
SMC_N
ABC_ATPase
AAA_22
AAA_21
AAA_29
Peptidase_C39
AAA_16
KAP_NTPase
DUF87
AAA_30
nSTAND1
RsgA_GTPase
AAA_23
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AII46756
LinkDB
All DBs
Position
1816192..1819149
Genome browser
AA seq
985 aa
AA seq
DB search
MTQSPPFPLLQLPAFKDLSSEGAARLQQETRGLKFDLGHQLVEDGEIPARVLVLLQGQAR
LVGEQRGRMTTVGKFGPGSILGAASLLCGHPCENVVAAQEVVAAAIPDETWLHLYKTESS
FRRWCDGQLWPQELQFLLETLIAGSANAEISTLQLLQTHYKACRHCAPTAEAIRAAQDEG
ATVFLSSSWGEASPGRLVQADSDLPPTDRFAPRLVALPQEVMDALGGDASLTTTASAVED
ASTSTLTLLPASEEEGSLPPVSHYSPERNVVDSLRLIRADGPIDETLACFQMLAQLMKLP
FRRDSIEKVLRDNLRRGLTPNLQLCGQLAASLGLHVMAARVPASAGTRLQVPSMIPWKGG
FALVVASNERGLKFASPKHGMVSLTTSELETSFPEGIELLLMERSNATPEQNFGPGWFWP
ALKRYRGVLTQVLAASFVVQLFTLANPLLIQVIIDKVITQRSLDTLQVLGIALVVVTILE
GVLGSLKTFLFAETTNRIDQRLGAEVIDHLLRLPLGYFDRRPVGELGTRVAELEKIRNFL
TGQALTTILDAAFSVIYILVMIVYSWLLTLIALSVLPIQVGMTILGAPLFRRQFRAAAEE
NAKTQSHLVEVLTGIQTVKAQNVEMVSRWRWQEFYSQYIARTFEKTITGTALNQTSQVLQ
KISQLMVLWVGASMVLKGELTLGQLIAFRIISGYVTQPLLRLSTIWQQIQELRVSFERLA
DVIDTPEESDEVDKSKVMLPPLEGQVRFENLSFRFRPGQPEVLKDVNLEIKPGTFVGIVG
QSGSGKSTLMKLLPRLYSPEEGRILIDGYDIDKVELYSLRRQIGIVPQDPLLFSGTVSEN
IALTNPEASSEEIVRAARLANAHDFIMELPSGYSTSVGERGASLSGGQRQRVAIARTLLS
NPKLLVMDEATSALDYETERKVCDNLLENLNDRTVFFITHRLSTIRNADIIVMLDKGAVV
ELGTHEELMNHRGRYFALYRQQGDA
NT seq
2958 nt
NT seq
+upstream
nt +downstream
nt
atgacccagtcaccccccttccccctgcttcagctgccggcgttcaaggatctcagctct
gagggtgccgcccggcttcagcaggagacgcgtggcctcaagtttgatctcggacatcag
ctggtggaggacggtgagattcccgcccgcgtgctggtgctgttgcagggccaggcccgc
ctggtcggtgagcagcggggacgcatgaccacggtgggcaagttcgggccgggaagcatc
ctgggagcggcaagtctgctctgcggtcacccctgtgagaacgtcgtcgctgcccaggag
gtggtggctgcggcgatcccggatgagacgtggctgcatctgtacaagacagagtcgagt
ttccgccgatggtgcgatggccagctgtggcctcaggaactgcagttccttctggaaacc
ctgatcgcaggctcggccaatgccgagatttccacgctgcagttgctccagacccactac
aaggcctgtcgccactgcgctccgaccgctgaagcgatccgagccgctcaggatgagggc
gccacggttttcctctcctcctcctggggagaagcctccccaggtcgtctcgttcaggcc
gactcggatcttcctccgaccgatcgtttcgccccccgcctggtggctctgcctcaggag
gtgatggatgccctcgggggtgacgccagtctcaccaccaccgccagcgcggtggaggat
gcatcgacgtccaccttgacgctgcttccggcctctgaggaggagggatccctgcctccc
gtgagccattacagcccggaacggaatgtggtcgacagccttcgactgatccgcgccgac
ggtccgatcgatgagaccttggcctgtttccagatgctggcgcagctgatgaagctgccg
ttccggcgcgattcgatcgagaaggtgctgcgcgacaacctgcggcgtggcctcaccccc
aatcttcagctctgcggacagctggccgccagcctcggtctgcatgtgatggccgcccgg
gttccggcttcagcggggacccggcttcaggttccgtcgatgattccctggaaggggggg
ttcgcccttgtggtggccagcaacgagcgcggcctgaagtttgcctctccgaagcacggc
atggtgagcctgacgacttcggagctggagacgagctttcccgagggcatcgagctgctg
ctgatggagcgctccaatgcgacgcctgagcagaacttcggccccggttggttctggccc
gctctgaagcgctaccgcggagtgctcacccaggtgctggctgcgagcttcgtggttcag
ctcttcaccctggccaacccgctgttgattcaggtgatcatcgacaaggtgatcacgcag
cgaagtctcgacacactgcaggttctcggtatcgcccttgtggtggtgaccatcctggag
ggtgtgctcggcagcctcaagaccttcctgtttgccgagaccaccaaccgaatcgatcag
cgcctgggagcggaagtgatcgatcacctgctgcgtctgcccctcggttacttcgatcgg
cggcccgtcggggaactgggcacgcgggtcgccgagctcgagaagatcaggaacttcctg
acaggtcaggccctgacgacgattctcgatgcggcgttttcagtcatctacatccttgtg
atgatcgtctacagctggctgctcaccctgatcgccctctcggtgctgccgatccaggtc
ggaatgacgattctcggagcaccgctgttccgtcgtcagttccgcgccgccgccgaggag
aacgccaagactcagagccacctggtcgaggtgctcaccggcattcagacggtcaaggcc
cagaacgttgaaatggtcagccgctggcgttggcaggagttctattcccagtacatcgcg
cgcaccttcgagaagacgatcaccggcacggctctgaaccagaccagccaggtgctgcag
aagatctcccagttgatggtgttgtgggtcggtgcctcgatggtcctgaaaggagagctg
actctcggtcagctgatcgctttccggatcatctccggctacgtgacccagccgttgttg
cgtctgtccacgatctggcagcagatccaggagcttcgggtgagctttgaacgccttgcc
gatgtcatcgacactcctgaggaatccgatgaggtggataaatcaaaagtgatgcttccg
cctctggaaggtcaggtgcgcttcgagaatctctcgttccgattccggcccggccagccg
gaagttctcaaggacgtcaaccttgagatcaagcccggcacctttgtcggcatcgtcggg
cagagcggcagcggcaagagcactctgatgaagcttctgcctcgtctctattccccagag
gagggcagaattctcatcgatggttacgacatcgacaaggtcgagctgtattccctgcgt
cgccagatcggcatcgttccgcaggatcctctgctgttcagcggcaccgtgagcgagaac
atcgctctcaccaatcctgaggcttccagtgaggagatcgtgcgtgcggcgcgtctggcc
aatgcccatgatttcatcatggaactacccagcggatacagcacctccgtcggtgagcgc
ggggcatctctcagtggtggacagagacagcgcgtggcgatcgcccgcacgctgctgagc
aatccgaagctgctggtgatggatgaagccaccagcgcactggactacgaaaccgaacgc
aaggtctgcgacaaccttctcgagaatctcaatgaccgcaccgtgttcttcatcacccac
cgcctgtcgaccatccgcaatgcggacatcatcgtgatgctggataagggcgcggttgtt
gaactcggtacccatgaggaactgatgaatcaccggggtcgttatttcgccctataccgc
cagcagggggacgcctga
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