Synechococcus sp. KORDI-49: KR49_12520
Help
Entry
KR49_12520 CDS
T03345
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
synr
Synechococcus sp. KORDI-49
Pathway
synr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
synr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KR49_12520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
synr03400
]
KR49_12520
Enzymes [BR:
synr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KR49_12520
DNA repair and recombination proteins [BR:
synr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KR49_12520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_C
PriA_3primeBD
ResIII
Helicase_C
Zn_ribbon_PriA
Zn_ribbon_6
AAA_25
tRNA_int_end_N2
AAA_30
Zn_ribbon_12
zf-CHY
C1_1
Motif
Other DBs
NCBI-ProteinID:
AII47214
LinkDB
All DBs
Position
2287872..2290124
Genome browser
AA seq
750 aa
AA seq
DB search
MKFSDPCNILSADGQPVDVWLEAGREGRVFTYRADPDLRLQPGDLVRVPLRNRTMHGLVV
GCPVQAMPADRQAALQPVEALLQRAAVPSDWRQWLDGVAERCHLSAFRMLKAALPAGWLG
QARASAVRSGRRLWWLQRTTAQPLPDLTQRQLDLLAYLDRQGGGSWQRGVEAAGFSGAVV
AALVRKGCIEREQRQSSADAELSSPPHLESPRVLTEEQQKAVAAYQTLAPGKGLLLWGIT
GSGKTEVYLQLAAAELAAGRHVLLLTPEIGLIPQLVDRCRRRFGARVLEYHSGCRDRERL
RAWQHCLEPDQPLVVVGTRSAMFMPLDPLGLVVLDEEHDSSYKQDSPMPCYHARDLAMDR
VQRCGGRVVLGSATPSLDSWVQLSPDGPLTLACLRRRISEQPLPPVHVVDMRHELAEGHR
RLISRPLMERLQQLPERGEQAVVLVPRRGYSPFLGCRSCGEVVQCPHCDVALTVHRGHGG
RQWLRCHWCDHRAEIETRCNHCGSTAFKPFGAGTQRVLELLAEELEDLRLLRFDRDSTGG
RDGHRRLLDRFAAGEADVLIGTQMLAKGMDLPRVTLAAVLAADGLLHRPDLRAGEQALQL
LLQLAGRAGRGERPGQVLVQTYSPEHPVIRHLVDGRYEDFLAQEIQLRREAGLVPFSRAC
LLRLSGESATATATAATVLAERIRPLCSSQGWWLVGPAPAPVARVAGRSRWQLLMHGPAG
SPLPLPSGEALWEGLPQGVALAVDPDPLDL
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgaagttttccgatccgtgcaacatcctgtcagctgacggtcagccggtcgacgtttgg
ctggaggccggtcgcgagggccgtgtcttcacctatcgggctgatcctgacttgcgtctg
cagccgggcgatctggtgcgcgtccccctgcgcaatcggacgatgcacgggctggtggtg
ggatgccccgtccaggcgatgcctgcagacaggcaggctgcgcttcagccggttgaggct
ctgctgcagcgcgcggctgttccctccgactggaggcaatggctcgatggcgtcgctgag
cgatgtcacctcagtgcgttccggatgctcaaggctgctctccccgcggggtggctcggc
caggcccgggcctcggccgttcgctccggtcgtcgactgtggtggctgcagagaacgacg
gctcagccgctgccggatctcacccaacgacagctggatctgctcgcgtatctggatcgt
cagggcggagggtcgtggcagcggggtgtggaggcggccggattcagtggcgctgttgtg
gcggcgctcgtccgcaaaggctgcatcgaacgcgaacagcgtcagtcgtcagctgacgct
gagctgtcgtccccccctcacctcgagtctccccgagttctcaccgaggaacagcagaag
gcggtggcggcgtaccagacactggctccaggcaagggattgctgctctggggcatcacg
ggctcaggaaagaccgaggtgtatctgcagctcgccgctgcagagctggcggcgggccgg
catgttctgctgctcacaccggagatcggactgatcccacagctcgtggatcgctgtcgc
cggcgcttcggagcccgggtcctggaatatcacagcggctgccgggaccgtgaacggctg
cgggcctggcagcactgtcttgagccggaccagcccctggtggtggtgggaacccgttcc
gcgatgttcatgcccctcgatccgctcggactcgtggtgctggatgaggagcacgacagt
tcctacaagcaggactctccaatgccctgctaccacgcccgtgatctcgccatggaccgg
gttcagcgctgcgggggccgcgtggtgctgggcagtgccacaccatcgctggacagctgg
gtgcagctgagccccgacgggcctctcaccctggcctgtctacggcgtcgtatttccgag
cagcccttgcctccggtgcatgtggtggacatgcggcacgaactggcggaaggacatcgc
cgcctgatcagccggcctctgatggaacggctccagcaactgccggagcggggcgagcaa
gccgttgtgctggtgccgcgccgtggttacagcccgtttctcggttgtcgcagctgcggt
gaagtggtgcagtgcccccactgcgatgtggcgctcaccgtgcatcgcggccatggagga
cgtcagtggcttcgctgtcactggtgcgatcaccgggctgagatcgaaacccgctgcaac
cattgcggttccacagcgttcaagcccttcggtgccgggacccagcgggtgctcgagctg
ctggcagaggagctggaggatctgcggttgctgcgcttcgatcgtgattccaccggtggt
cgcgatggacaccgccgtcttctggaccgcttcgcggccggggaggcggatgtgctgatc
ggaactcagatgctggccaaggggatggatctcccccgggtcaccctggccgcagtgctc
gcggccgacggcctgctgcaccgccccgatctgcgggcgggcgagcaggcgttgcagctg
ctgctccagctggcggggcgtgccggtcgtggcgagcgcccggggcaggtgctggtgcag
acctattcaccggagcatccggtgatccgtcatctggtggatgggcgatacgaggatttc
ctggcccaggaaatccagctgcgacgggaggctggactggtgcctttcagtcgcgcctgt
ctgttgcgtctgtcgggagagtcggccacggccacggccacggctgcgacggtgcttgcg
gagcgaattcggcctctctgctcctcccagggttggtggctggtgggtccggctccggcg
cctgtggcacgggtggccggtcgcagtcgctggcagctgttgatgcacgggccggcggga
tcaccgttgcctttgccttccggtgaagcgctgtgggagggactgccacagggagtggcc
ctggcggttgatccggatcctctggatctctga
DBGET
integrated database retrieval system
