Synechocystis sp. LKSZ1: OLK001_07470
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Entry
OLK001_07470 CDS
T10519
Symbol
dnaE_1
Name
(GenBank) DNA polymerase III alpha subunit [Contains: Ssp dnaE intein]
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
syns Synechocystis sp. LKSZ1
Pathway
syns03030
DNA replication
syns03430
Mismatch repair
syns03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
syns00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OLK001_07470 (dnaE_1)
03430 Mismatch repair
OLK001_07470 (dnaE_1)
03440 Homologous recombination
OLK001_07470 (dnaE_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
syns03032
]
OLK001_07470 (dnaE_1)
03400 DNA repair and recombination proteins [BR:
syns03400
]
OLK001_07470 (dnaE_1)
Enzymes [BR:
syns01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OLK001_07470 (dnaE_1)
DNA replication proteins [BR:
syns03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OLK001_07470 (dnaE_1)
DNA repair and recombination proteins [BR:
syns03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OLK001_07470 (dnaE_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HHH_6
tRNA_anti-codon
tRNA_anti_2
INT1_R3
Uso1_p115_C
Motif
Other DBs
NCBI-ProteinID:
BFM38821
LinkDB
All DBs
Position
794999..796354
Genome browser
AA seq
451 aa
AA seq
DB search
MVKIVGHRSLGLRPVYDLGLGQDHNFMVAPGLIAANCFNKSHSTAYAYVTYQTAYLKANY
PVEYMAALLTASSDSQDKVEKYRENCQKLGIEVEPPDINRSQRDFTPLGQSILFGLSAVR
NLGEGAIDMILAAREEAGGHFQSLADFCSQVDLRVVNRRAIETLILAGAFDHLQSNRNQL
LQDLELVMAWVQKRTKEKETGQMNLFDLMEAPSPQADSQANEFEQAPSAPPVPDFSLQEK
LKLEKEHLGFYVSEHPLKAVQKAAKLLSPISLGEIENYRARQRVSAVAIMVAVKKIITRK
GTPMAFVTLEDVSGQAEGVVFPDNYERLLPALIEDQQVMIWGKIDKREERIQLMIEDIEA
IEAVRMVMINLTPQQIFNNSAQQTLKNILRSSTTDNKAKGKVPVLATVTEGIQKHIIRFG
ENYWVEDPHQALDSLQRAGFQASARPLVASS
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggtaaagattgtgggccatcgctctctaggactgcggccagtttacgacctaggtcta
ggtcaagatcataattttatggtggcgccgggactcatcgccgccaactgtttcaataaa
tctcactccactgcctacgcctacgttacctaccagacagcctacctcaaggcgaattat
ccggtggaatacatggcggccctcctaaccgctagtagtgatagtcaagataaggttgaa
aaataccgagaaaactgtcagaagctgggaattgaggttgagccaccggatattaatcgc
tcccaacgagactttacccccctaggccagagcattctttttggcctgtcagcggtgcgt
aacttaggggaaggggctattgatatgatcctggctgcccgagaagaagccggagggcac
tttcaatccttggcggatttttgctcccaggttgatctgcgggtggttaaccgacgagct
attgaaaccctaatccttgccggtgcctttgaccatctccaatccaatcgcaatcaactc
ctccaggatctggaactggtcatggcctgggttcaaaagcggacaaaggaaaaagaaacc
gggcaaatgaacttatttgacctgatggaagcccctagtcctcaggctgatagccaggct
aacgagtttgagcaggccccctccgctccgccagtgccagatttttcccttcaggaaaaa
ttaaaactcgaaaaggaacatcttggtttttatgtatccgagcatcccctcaaagctgtg
cagaaagcagctaaattactatcgcctattagtctgggggaaattgaaaactatcgggcc
cggcaacgggtcagtgcggtagccattatggtggcggtgaaaaaaattatcacaagaaag
ggaactcccatggcctttgtcactctagaagatgtgtcagggcaggcagagggggtggtt
tttcctgacaactacgaacgtctcctgccggctttaattgaagatcaacaggtgatgatt
tggggcaaaattgacaaacgggaggagcgcattcaactgatgatcgaagatatcgaggcc
attgaggcagtcagaatggtcatgatcaacctcacaccccagcaaatttttaacaatagc
gcccagcaaacactcaagaatatcttgcgctcctctacaacggataacaaggcgaagggc
aaagtccccgtcctggcaacggtgacagaaggcattcaaaaacacattatccgctttggt
gagaactattgggttgaagacccccatcaagccttggattctttgcaacgggccggtttc
caggccagtgctaggcccttggtggcttcatcatag
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