Synechocystis sp. LKSZ1: OLK001_10130
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Entry
OLK001_10130 CDS
T10519
Symbol
dnaX_2
Name
(GenBank) DNA polymerase III subunit gamma/tau [Contains: Ssp dnaX intein]
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
syns Synechocystis sp. LKSZ1
Pathway
syns03030
DNA replication
syns03430
Mismatch repair
syns03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
syns00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OLK001_10130 (dnaX_2)
03430 Mismatch repair
OLK001_10130 (dnaX_2)
03440 Homologous recombination
OLK001_10130 (dnaX_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
syns03032
]
OLK001_10130 (dnaX_2)
03400 DNA repair and recombination proteins [BR:
syns03400
]
OLK001_10130 (dnaX_2)
Enzymes [BR:
syns01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OLK001_10130 (dnaX_2)
DNA replication proteins [BR:
syns03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OLK001_10130 (dnaX_2)
DNA repair and recombination proteins [BR:
syns03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OLK001_10130 (dnaX_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
Intein_splicing
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
DnaA_N-like_STI
PT-HINT
RuvB_N
Rad17
AAA_22
AAA_16
AAA_18
Herpes_Helicase
AAA_28
Motif
Other DBs
NCBI-ProteinID:
BFM39087
LinkDB
All DBs
Position
complement(1087617..1090763)
Genome browser
AA seq
1048 aa
AA seq
DB search
MGYEPMHHKYRPQTFADLVGQEAIATTLSNAIVQERIAPAYLFTGPRGTGKTSSARILAK
SLNCIAGENPTPSPCGQCAICQAIIKGSALDVIEIDAASNTGVDNIREIIERAQFAPVQC
RYKIYVIDECLVGSSLVQTSRGLMRIDNPDLLGKKVLSYNETTNSWEYKKVTRWLERGQK
KTLLIHTKQGTIQCTPNHLIRTEKGWISAENLTAGMKILSPVSVDAEPLSKNTEQIIAAA
ALYEDTNSKGINSDKKITILPPFWSKQNLSGHSVPAAVVRNWQSQNSCKKKALVFRGSNP
IGKSILTKKAMEYGISEPKNSWEHWKLYPPKNWDLSMELCSGMPTLPNQIPTVASPVWDG
LTVNLSENGQNIKQSNYPNFKSKLIVESIKDTEIIPSYVTPSVIPSYVISLKPLDLTIRL
KLFLLTGWKKLPVKESPGGIWMMVLLSLVLKEVLIFNFILKDTPNQKISFWPIGLPPTDT
WLKSENIKSLTLKKFTTTYPLKQKAPENSLTILNNTQSLPWTTNLVTVESVTLAGIEAVY
DLEVEDNHNFVANGLLVHNCHMLSAAAFNALLKTLEEPPERVVFVLATTDPQRVLPTIIS
RCQRFDYRRIPLASMVAHLTHIAQAEAIALKPEALTLVAQLANGGLRDAESLLDQLSLLP
GPVTPEQVWDLVGTVPEQDLLKLLQAIAADNPEQLLDIGRQILNRGREPLVVLQNLASFY
LNLLIARTAPQRTDLVAVTASTWQALVQLAQSWPINTILQGQQCLREAEVQLRNTTQPQL
WLEVTLLGLLPSAVGNAPAVSTASAVAPSPMPVSPPPSPPVIPEPASPEESVAAVPSPST
PTPLPSPATTDLAQVWQDCLPYLSPAAQALLKVHGSLVHLDTSLAQIGMRSDPLLRMAQQ
HQADVEVALRRICQRPLQVKFILQMAMAPAVNPSQPVAKPESPQLVPVPSPPPPPKVQAL
PTPKPSVSTPAPVPPTVNPPSSPSPETETVSQPQDLHKAMERLAKNFEGQWIRAEDSDPT
PPSEEHKPMITGRPLPPTLATDDEDIPF
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgggttacgaaccaatgcaccacaaatatcgcccccagaccttcgctgacctcgtgggg
caggaagccattgccacaacgctaagcaatgccattgtgcaggaacgcatcgcccccgcc
tacctctttacggggccgcggggaacgggcaaaacctcttcggctcgcattttagctaaa
tccctgaattgtattgccggggaaaaccccacccccagtccctgtggccagtgcgcaatt
tgccaggccattatcaagggatcggcgctggatgtgattgaaattgatgcggccagcaac
accggcgtagataacatccgggagatcattgaacgggcccagtttgcaccagtacagtgt
cgctataagatttatgttattgatgaatgtttagttggtagtagcctcgtccagacatcg
cggggtttaatgcgtattgacaatcctgatttattgggcaaaaaagtcttaagttataac
gaaacaacaaattcatgggagtacaaaaaagtgactcgctggctcgagcgagggcagaaa
aaaacactgttaatacacaccaaacaagggacaattcaatgtacaccaaatcatcttatt
aggacagaaaaaggatggatatcagcagaaaatctaacagccgggatgaagatcttatcc
cctgtgagtgtggatgcggaacccttatcaaaaaatacggaacagatcatcgccgccgcc
gctttgtacgaggacaccaattcaaagggaataaattcggacaaaaagattacgatcttg
cctccattttggtccaagcagaacctctccggccattctgtgcctgcggctgtggtcaga
aattggcagtcccagaattcatgcaaaaaaaaggctttggtcttcaggggatccaatcct
attggcaaaagcatccttaccaaaaaggccatggaatatgggatctccgaacccaaaaac
tcctgggaacattggaagctctatcctccgaaaaattgggacttatctatggaactctgc
tcggggatgcccacattaccaaaccaaatccctacagtcgcttcccccgtctgggatgga
ctcacggtgaatctcagcgagaatgggcagaatataaagcaaagcaactacccgaacttc
aaatccaaattaatcgtcgagtcaatcaaggatacggaaattattccatcgtatgtcact
ccatctgtcatccccagctatgtgatatctttgaaaccgttagacctaaccatcaggcta
aagctatttcttctaactggttggaaaaagttaccagtgaaggaatcgcctggtggtatt
tggatgatggttctcttatccttagtcctcaaggaagtcctcatattcaatttcatactg
aaggatactccgaatcagaaaatcagcttttggccgattggcttacctcccacggatacc
tggctgaagtcagaaaatataaaaagtctaacactaaaaaaatttactactacttatccc
ttaaagcaaaaagcacccgaaaattccttaacgattttaaacaatactcaatccctacca
tggactacaaatttggtaacggtcgagtctgtaaccctcgctggcattgaagctgtttat
gaccttgaagtagaagataatcacaattttgttgccaatggtcttctagttcataactgc
catatgttaagtgcggctgcgttcaatgccctactcaagaccctagaagaacctccagaa
cgagtagtctttgtattagccacaaccgatccccagcgagttctacccacaattatttcc
cgctgtcaacgcttcgactatcgccgtattccccttgcgtctatggtggcccacctcacc
catattgcccaggcagaggccattgccttgaaacccgaagctctgaccctggtggcccag
ttggccaatgggggcctgcgggatgcagaaagtctcctcgaccaacttagtttactgccg
ggcccggtaaccccggaacaggtctgggatttagtgggaacggtgccagagcaagacctc
ttgaaactgctccaggccattgccgctgataatcctgaacagcttttggatatcggtcgt
cagatcctgaaccggggccgggaacccttggtcgtcctgcaaaacctagctagcttttac
ctgaacctgctgattgcccgcacggccccccagcgcacagacctcgtagcagtgacggcc
tcgacctggcaagccttggttcagcttgcccagtcttggccaattaacaccattcttcag
ggccaacaatgcctgcgagaagccgaagtccaactccgcaacaccacccaaccccagctt
tggctagaggtaacgcttttgggcctgcttccctccgcagttggcaatgcccctgccgta
tcaaccgcctctgccgttgccccctcgccaatgccagtgagtccaccaccatcgcctcca
gtgattccagaacccgcttccccggaggagtcggtggccgccgtcccatcgccctcaacc
ccaaccccactaccttccccagcaaccacggatctggctcaagtttggcaagactgtttg
ccctatttgtccccagcggcccaggccctcctaaaggtacacggcagtcttgtccactta
gatacctccctggcccagatcggtatgcggagcgacccgctcttgagaatggcccaacag
caccaagcggatgttgaagtggccctgcggcggatttgccaacgaccactccaggttaaa
tttattctccaaatggcaatggccccggcggtcaatccttcccaacccgtggcgaagcca
gagtccccccagctggttcccgtgccctcgccaccgccccctcctaaagtccaggccctg
cccactcccaagccgtctgtttctaccccagcccctgtccccccaacggtcaatcctccc
tcgtccccctctccagagaccgaaaccgtcagtcagcctcaagaccttcataaggccatg
gagcggttagccaaaaactttgagggccagtggatccgggccgaagactcagacccgaca
cctccgagcgaggagcataaacctatgattacgggtcgccctctgccaccgacactcgca
accgatgatgaagatattcctttctag
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