Synechocystis sp. LKSZ1: OLK001_10980
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Entry
OLK001_10980 CDS
T10519
Symbol
recG
Name
(GenBank) DNA recombinase
KO
K03655
ATP-dependent DNA helicase RecG [EC:
5.6.2.4
]
Organism
syns Synechocystis sp. LKSZ1
Pathway
syns03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
syns00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
OLK001_10980 (recG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syns03400
]
OLK001_10980 (recG)
Enzymes [BR:
syns01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OLK001_10980 (recG)
DNA repair and recombination proteins [BR:
syns03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
OLK001_10980 (recG)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecG_wedge
Helicase_C
RecG_dom3_C
ResIII
Cas3-like_C_2
tRNA_anti-codon
AAA_30
SNF2-rel_dom
SLFN-g3_helicase
SecA_DEAD
Motif
Other DBs
NCBI-ProteinID:
BFM39172
LinkDB
All DBs
Position
complement(1179761..1182205)
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AA seq
814 aa
AA seq
DB search
MTDLASPDWLRLQKALALEAERGFLDLQGHRHRFSEFLVLSLQVGPPPEAPTEACQRWQD
LFQRFQQYPHLSLAHRQSLVAQTRRFLQDLRQTLEAPAPPPTKTLALQAPAVYDLALTTP
LIQVKEIGQHRAKLLALLGLRTVRDVLFYFPRDHIDYAKQVAIVDLVPGETVTLIGRVIR
SNCFTSPKNRNLNIFEVQIRDATGRIKLNRFYAGQRFANKGWQERMKKLYAPGVVIAASG
LVKANKYGLTLDTPEIEILDSSNAPIESLKVGRVLPVYPLTEGVTADMVRWTVLTCLGAL
PQLTDPLPSELQEKYELIDLPTAIANIHFPENREDLEPARRRLIFDEFFYLQLGFLHRRY
QQKQTEQSVVLTPQGELMERFHGILPFQLTQAQQRVVQEILQDLTAPAPMNRLVQGDVGS
GKTVVGVFAILAAIQSGYQAALMAPTEVLAEQHYRKLVGWFNLLYLPVELLTGSTKTAKR
RQIHQQLVTGELPLLVGTHALIQDAVNFNRLGLVVIDEQHRFGVQQRARLLAKGQTPHVL
TMTATPIPRTLALTLHGDLEVSQIDELPPGRQPITTMVLTSKERLQAYDLIRREVAQGRQ
VYIIFPVIEESEKLDVKAAVEEYQRLSAVVFPDFRLGLLHGRMAAADKDAALTAFREQQT
QIIVSTTVIEVGVDVPNATVMLIENAERFGLSQLHQLRGRVGRGSHRSYCLLMTNSKTPD
SRQRLAVLEQSQDGFFIAEMDLRLRGPGEVLGTRQSGLPDLALASLAEDQAVLFLAREAA
EHLMQRDSELQAWPELRAELTARHQRLMGREILT
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
gtgactgaccttgcttcccccgattggctccgcctgcaaaaggctctggcccttgaggct
gagcggggttttctcgacctccagggccatcgccatcgttttagtgaatttttagttcta
agtctccaggttggccctccccccgaagcgccaacggaggcctgtcaacgctggcaagac
ttgtttcaacgttttcagcagtatccccacctcagtctggcccatcgccaaagcctggta
gcccagactcgtcgttttttacaagacctgcgacaaaccctagaagctcccgccccgccc
ccgactaaaacattggccctccaggccccggcggtttatgacctggctctaaccacgcct
ctgatccaggtgaaggaaattggccagcatcgcgctaaattattggccctactcggcctg
agaaccgtgcgggacgtgttgttttactttccccgtgaccacatcgactacgccaaacag
gtagccattgtggatctcgttcctggcgaaactgttaccctgatcggccgggtaattcgc
agtaattgttttaccagtcctaaaaatagaaacctgaatatctttgaagtccaaattcgg
gatgccacgggccgcattaaattgaatcgtttctatgcggggcaacgctttgccaataaa
ggctggcaggagcgcatgaaaaagctctacgcgccgggagtcgtgattgcggcttctggc
ctggtcaaagccaataaatatggccttaccctcgataccccagaaattgaaatcctagat
agcagtaatgcccccattgaatccctcaaggtgggccgcgttctaccggtttaccccctc
acggaaggcgtaacggcggacatggtgcgctggacggtgttaacttgtcttggggccttg
cctcaactgaccgaccccctaccctcggaactgcaagaaaaatacgaactgattgatctg
cccacggccattgccaatatccactttcctgaaaaccgagaggatttagaaccggcccgg
cggcggctgattttcgatgaatttttctacctgcaattgggctttttgcatcgtcgttac
cagcaaaagcagacggaacagagtgtcgtgctaacgccccagggtgagttgatggaacgc
ttccatgggattttgcctttccagttaacccaggcccaacagcgggtggtgcaggagatt
ctccaggatttaacagccccggcccccatgaatcgcctagtacaaggagatgtagggtca
ggaaaaaccgtggtgggggtctttgccatcctcgcggcgattcaatcgggctatcaagcg
gccctgatggccccgacggaagtgttggcggaacagcattaccgtaaattagtgggctgg
tttaatcttctctatctgcctgtcgaactgctcactggctcgaccaaaactgctaaacga
cgacagattcaccaacagttggtcacgggggaattgcccctactggttggcacccacgcc
ctgatccaggatgccgttaatttcaatcgcctcggcctggtggtgattgatgagcaacac
cgctttggcgttcagcaacgggccagactcttagccaagggccagacgccccatgtctta
accatgaccgccactcccattccccgcaccttggccctgaccctgcacggggatctggaa
gtgagtcaaattgatgaactgccccccggccgtcaaccgattaccaccatggtgttgacg
tctaaggaacgcctccaggcttacgacctgatccgtcgagaggtggcccagggccgccag
gtttatatcatttttccggtgattgaagagtcggaaaaattagatgtcaaagccgccgtg
gaggaataccagcgtctgtcggcagtggtctttcctgactttcgtctaggtctgttacat
ggccgcatggcggcggcagataaggatgcggccctgacggcctttcgggaacagcaaacc
caaattattgtctccaccacggtgattgaggtaggggtggatgttcccaatgccacggtg
atgctcatcgaaaacgccgaacgctttggcctgtctcagcttcatcaactccgggggcgg
gtaggccggggcagtcatcgctcctactgtctcttaatgaccaatagcaaaacccccgat
tcacgacaacgtctagcagtgttggaacagtcccaggatggctttttcattgctgaaatg
gatctgcgtctacgagggccaggagaagttttgggcacacgccagtcgggcctgccggat
ttggccctggccagtttggcggaggatcaagcggtgttgtttttggctcgggaggccgct
gaacacctgatgcagagggatagtgaactccaggcttggccggaactgcgagcagagtta
acagcccgccatcaacgcctgatgggccgagaaattttgacctag
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