Synechocystis sp. LKSZ1: OLK001_19160
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Entry
OLK001_19160 CDS
T10519
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
syns Synechocystis sp. LKSZ1
Brite
KEGG Orthology (KO) [BR:
syns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syns03400
]
OLK001_19160 (radA)
DNA repair and recombination proteins [BR:
syns03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
OLK001_19160 (radA)
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Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
DnaB_C
AAA_22
ChlI
Lon_C
AAA_16
AAA_24
nSTAND3
NACHT
AAA
DZR
ATPase_2
NTPase_1
AAA_14
Zn_Ribbon_1
MCM
DUF7125
DUF7129
SLFN-g3_helicase
zf-Tbcl_FmdE
Motif
Other DBs
NCBI-ProteinID:
BFM39990
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Position
2098150..2099595
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AA seq
481 aa
AA seq
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MAKPRSIYVCSHCGADYPQWHGKCPACGTYSSLQEQALPSSASQSVGRQRPVASRTTKSK
ADPRPHQALTFSQIPEEDQGRFASGYGELDRVLGGGIVPGALMLIGGDPGIGKSTLLLQV
AFQLAQRLPRILYISAEESAQQIKLRATRLGVTPPTAERGASGLSERLYLLAETNLEEIL
RELEALRPQVAVIDSIQNLYFPALSSAPGSVAQVRECTGILMQVAKRDNISLFIVGHVTK
EGSIAGPKVLEHLVDTVLYFQGDRYASHRLLRSVKNRFGATHEIGIFEMVEAGLQEVSNP
SQLFLGNREDPTSGTVITVACEGTRPLVVELQALVSPTSYPSPRRSTAGVDYNRLQQILA
VLEKRVGIPLSKLDAYVSAAGGLEVDEPAADLGVALALVASFRDKVIEPTLIVLGEIGLG
GQIRAVSHLDLRLKEAAKLGFKQALIPKGQVPSEKLGLKITPVAKIFEAIVAALPPPAKS
D
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggccaagcctcggagtatctatgtctgtagccattgtggggcggattatcctcaatgg
cacggtaaatgtccggcctgtggcacctacagcagtttgcaggaacaggcccttccgtct
agtgccagtcagtccgtgggccgacagcgccccgttgcgagtcgcaccacgaagtccaag
gccgatccccgtccccaccaggccctgaccttttctcagattcccgaggaagaccagggc
cgttttgcctcgggttacggagaactagatcgcgttctcggcggcggcattgtccctggg
gccttaatgctcattggtggcgatcccggcattggtaaatcaaccctcttactgcaggtg
gcctttcagttggcccagcgactaccccgcattctctacatttctgcggaggaatcggcc
cagcagatcaaattacgggcgacccgtttgggggtcacaccaccgaccgctgagcgggga
gcttccggcttgagtgaacggttatacctgctggcagaaaccaacctggaggaaattctg
cgggaattggaggccctgcgtccccaagtagcagtcattgatagtattcaaaatctctac
tttccggccctcagttcggccccgggttccgtggcccaggttcgagaatgtacggggatt
ctgatgcaggtggccaagcgcgataacattagtctgtttattgtgggccatgtcaccaag
gaagggtccattgctgggcccaaggttctagaacatttggtagataccgtcctctatttc
caaggcgaccgctatgcctcccatcgactcctgcggtcggtgaaaaatcgttttggggcc
acccatgagatcgggatttttgaaatggtggaggcgggcctacaggaggtgagtaatccc
tcccaattatttctgggcaatcgagaagatccaacgtcgggaaccgtgatcaccgtagcc
tgtgaaggcacccgacccttggtggtagaactccaggccctggttagtcccaccagctac
ccttcgcctcgacgttctacggcgggggtggactacaaccgtctccagcaaattttggct
gtcctggaaaaacgggttggtattcccctatctaaactggatgcctatgtttctgcggcg
gggggcctggaggtggatgagccagcggcagatctgggggtagctctggccctagtggct
agttttcgagataaagtgatcgagcccaccctgattgtcctcggggaaattggcctgggg
ggtcaaattcgagcagtatcccatctcgatctgcgtcttaaggaggccgctaaactgggc
tttaagcaggccctgattcctaagggccaggtaccgagcgaaaaactggggctgaaaata
acgcccgtggctaaaatttttgaggcgattgtggcggccctgccccctccagccaaatcg
gactag
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