Synechocystis sp. LKSZ1: OLK001_20990
Help
Entry
OLK001_20990 CDS
T10519
Name
(GenBank) putative SNF2 helicase
Organism
syns Synechocystis sp. LKSZ1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
ResIII
DEAD
AAA_22
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
BFM40173
LinkDB
All DBs
Position
2327873..2330968
Genome browser
AA seq
1031 aa
AA seq
DB search
MATLHGSWRMTPMGRSFFLWGETWRDEVIPPEPEAKLPFHPFCLNSTELQVWLEQELSLK
MTRAQPQTETLTLPSRVQKKQSLPLLASQIGEGLKPQGLTLTPWQISGLALAPSETLALL
QAIPLGETEAPFWGQELFFFAHLYRWSLDLLARGKMVPGVQADRLGAQAVWYPVLDSTLD
QARLALLCQALPPCCLADSHSKQEVGPHALILDCLQGLLQAIIGESGLTPMANREPWLQP
WLQGLVSRTPQPLPESTAQKLLTPLQHWQLPIQTYLGHRHNRALEQRQFRVALRLAPPPS
GSENWRLEYLLQALDEATFQVEAASIWQLEAEAMVYHGRTIHHPSETLLQGLGLASRYYP
PIAQSLETGYPTGCDLDPIQAYEFIQAIAWQLQDRGLGVILPAGLQGGQSSQRLGVSIQS
QVQPKKGERLSFQSLVSYRLQLMLGKQVISERDFQNLLDQRSPLVEIGGQWLILQPVEVR
AAQAILQQRQGPLDLTVEEALRLAVGERQTLAKLPVVKFEATGILQDLIQTLSNPQGVKP
MAAPPGFKGELRPYQARGVGWLAFLERWGLGACLADDMGLGKTPQLLAFLLHLQAEASLE
QPVLVVCPTSVLSNWWHEVQKFAPGLKVTLHHGDRRKKGQPLLKAYQSQHLILTSYSLLH
RDLSSLKLVQWRGIVLDEAQNIKNAEAKQSQSVRQLTAGFRIALTGTPVENRLRELWSIL
DFLNPGFLGSQAYFQKRFATPIEKYGDRQSLYALRSLVRPFILRRLKTDQSIIQDLPAKQ
EMTVFCALSRRQAELYQQLVDQALENIETSTGIQRHGQILTLILKLKQLCNHPAQFLKEP
QLSQPEASGKLLRLEEMLEEVVSEGERALIFTQFAEWGHLLQPYLTHKFKRDVLYLHGGT
PRLKRQALIERFQNDPDGPQLFILSLKAGGTGLNLTRANHVFHVDRWWNPAVENQATDRA
FRIGQTRNVQVHKFVCTGTLEEKIHQILESKQQLAEQTVDAGENWLTQLDTDQLRQLLLL
DRGSIIDEEST
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccttacacggtagctggcggatgactcccatggggagatctttttttctgtgg
ggagaaacctggcgagatgaggtgattccccctgagcctgaagcaaagcttccttttcat
cctttttgcctcaacagcactgaactccaggtctggctagagcaggaactgtctttaaag
atgaccagggcccaaccccaaacggagaccctgacgcttcccagtcgcgtccagaaaaaa
caatccttaccgctcttggcgagtcaaatcggagagggccttaagccccagggtctgacc
ttgactccctggcagatctctggcctggccttagctccctccgaaacgttggcacttttg
caggcgattcccctaggagaaacagaagcccccttctggggccaggagctctttttcttt
gcccatctctaccgctggagtttagaccttttggcccggggcaagatggtgcctggcgtg
caagcagataggctaggagcccaggccgtttggtatcccgttttagacagtaccctcgac
caagctcgtttagctcttctctgccaggccttgccgccctgttgtttagccgatagccat
tctaagcaagaagtcggcccccatgccctaattctcgactgtctccagggcctgctccag
gccatcatcggtgaaagcggcctcacccccatggccaaccgagagccttggttacagcct
tggctccaggggttagtctctcgaacgccccaaccattaccagaaagcacggcccaaaaa
ctactcacccccctccagcactggcaactccccatccagacctatctagggcatcgccac
aatcgggctctggaacaacgtcaatttcgagtggccctccgtttggccccaccgccatcc
gggtcagaaaactggcggctagagtatctgcttcaggccctggatgaggcaacctttcaa
gtcgaagcggccagtatttggcaactcgaggccgaagccatggtttatcacggccggaca
atccatcacccctcggaaacgctcttgcagggtctaggcctcgcgtctcgttactatccc
cccattgcccagagtttagaaactggctatccgacgggctgtgaccttgaccctatccag
gcctacgagtttattcaggccattgcttggcagttgcaagaccgagggctgggggtaatt
ctaccggcgggcctccagggcggccaatccagtcaacgtctgggggtcagtattcagagc
caagtccagcccaaaaaaggtgaacgtctcagctttcaaagtttggtgagctatcggtta
caactgatgctggggaagcaggtgatttccgagcgggatttccagaacttactagaccag
cgttctcccttagtggaaattggcggccaatggctaattctgcaaccggtggaagtccgg
gcagcccaggcaattctacaacaacgccaagggccgctcgatttaaccgttgaagaggcc
ctgcgtctagccgtgggagagcgccaaaccctggccaaacttcccgtggttaagtttgag
gccacgggtattctccaagacctaatccagaccttgagcaatccccaaggggtcaaaccc
atggccgcaccacccggttttaaaggagagctgagaccctaccaggccaggggggtaggc
tggttagccttcttggaacgctggggcctgggggcctgtctggctgatgatatgggatta
gggaaaacacctcaactcttggcgtttctgctccatctccaggccgaagccagtttagag
caaccggttctagtcgtctgtccaacctctgtgctcagcaattggtggcatgaagtccaa
aaatttgcccctggtctgaaagtcaccctccatcacggcgaccgccgtaaaaagggccaa
cccctgctcaaggcctatcaatcgcaacatctgatcttgaccagttactccctcctacac
cgcgatttaagcagtctcaagcttgtccagtggcggggtattgttctagatgaggcccaa
aatattaaaaatgctgaagctaagcagtctcagtccgtccgtcaactcaccgccggtttt
cgcattgctctgacgggaaccccggtggaaaaccgtctgcgggaactgtggtcaattcta
gattttctgaaccctggctttttgggcagtcaggcctacttccaaaaacgctttgctacc
cccatcgaaaaatacggcgaccgtcaatccctctacgccctccggagtctggtgcggccc
tttatcctgcgtcgcctcaaaaccgaccagagcatcattcaagacctgcccgctaaacag
gaaatgacggttttttgtgccctctcccgtcgtcaggcagaactgtaccagcaattggtc
gatcaggccctagaaaatattgaaaccagcaccggcattcaacgccatggccagatcctg
accctgatcctgaaactgaagcaactctgcaaccatccagcccagtttctcaaggaaccc
cagttgagtcaaccagaggcctccggcaaattactccgcctagaagagatgctggaagaa
gtggtgagcgaaggggaacgggccctaatctttacccaatttgcggaatggggccatctc
ttgcaaccctatttaacccacaaatttaaacgggatgtcctctacctccatggcggcacc
ccccgcctcaaacgtcaggccctgatcgagcgtttccagaacgaccccgatggccctcaa
ctctttatcctttccctcaaggccggcggcacaggcctcaacttaacccgtgctaaccat
gtctttcacgttgaccgttggtggaatcccgccgtggaaaaccaggccacggaccgggcc
tttcgcattggccagacccgtaatgtccaagtccacaagtttgtttgcaccggcaccctg
gaggaaaaaatccaccaaattctggaaagcaaacaacagctagcggaacaaacggttgac
gccggggaaaactggttaacccaactcgacaccgatcaattgcgccaactactgcttcta
gaccggggcagtattatcgatgaagaaagcacctag
DBGET
integrated database retrieval system
