Synechocystis sp. LKSZ1: OLK001_24440
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Entry
OLK001_24440 CDS
T10519
Name
(GenBank) DNA mismatch repair protein
KO
K03555
DNA mismatch repair protein MutS
Organism
syns Synechocystis sp. LKSZ1
Pathway
syns03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
syns00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
OLK001_24440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
syns03400
]
OLK001_24440
DNA repair and recombination proteins [BR:
syns03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
OLK001_24440
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
Motif
Other DBs
NCBI-ProteinID:
BFM40518
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Position
2756636..2759302
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AA seq
888 aa
AA seq
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MTPDPAALEFSGPATNKNPHRDYRPLDRAKLTPLFQHYIEAKEQNPGALLFYRVGDFYEC
FFQDAVIISQELELVLTSKEGGKEIGRVAMTGVPHHALERYSRLLVEKGYALAIGNQVED
AAEAQAEKRMVERQVTKLLTPGTLTDDSMLPPRRNNFLAAVVITGANWGLAYADISTGEF
FTLQSANLEDLALELLRLQPAEVLVPTSAPDVRGLLRPGESSPHLPQGLPTGFCYSLRSP
KPFDVIEAKQKLLTIFRIRSLEGLGCEGLPLAIRAAGGLLEYIEETQKANLVPLQPLKTY
NLTDFMVLDHQSRRNLEIHQTVREGSFYGSLLWALDRTCTSMGGRALRRWLLQPLLDPKG
IRARQQTIQELIEQSPLRQDLRQVLRQIYDLERLSGRVGAGSANARDVLGLATSLVRLTD
LAHLASQGQSPYLRALHNIPPDLEELGRYVIANLVENPPLHLKEGGVIRPGVNEALDQMR
QRIEDDNQWLANLEVTERQRTGISNLKVGYNKTFGYYLSLPRSKAEQVPDNYIRKQTLVN
EERYITPELKERESRILTAQDDLNQLEYEIFVEIRDKVAEKVQPIREVAKAVAALDVLSG
LADVAIFQGYCCPEISADQGLEIVAGRHPVVEQILGAGFFVANDTHLGSQALESHPDLII
LTGPNASGKSCYLRQVGLIQLMAQTGSFVPARSARLSICDRIFTRVGAVDDLATGQSTFM
VEMNETANILNHATPQSLVLLDEIGRGTATFDGLAIAWSVAEYLATAIKARTIFATHYHE
LNELASILDNVANYQVTVQELPNDIVFLHQVQPGGADKSYGIEAGRLAGLPKSVIQRARQ
VMGQIEKHSKIAVGLRKSNPTKTKVQDSATKGLPPLQAEQLDIFGQVT
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgacccctgaccctgcggccttggagttttccggccctgccaccaataaaaatccccat
cgtgattatcgtcccctagaccgcgccaagttaacacccctgtttcagcactacatcgaa
gccaaggaacagaatcctggggccctgttgttctaccgggttggggatttttacgaatgc
tttttccaggacgcggtgattatttcccaggaattagaactggtcttgaccagtaaggaa
gggggcaaggaaattggccgggtggccatgacgggagttccccaccacgctctagaacgt
tacagtcggttgttggtggaaaagggctatgccttggccattggcaatcaggtggaagat
gcggccgaggcccaggcggaaaagcgcatggtggaacggcaggtcactaaactgctaacg
cccggtaccctcactgacgatagtatgttgcccccccgacgcaataattttttggcagcg
gtggtgatcaccggggccaattggggcctggcctacgccgatatttctacaggggaattt
tttaccctccagtccgctaacttggaagacctggccctggaattactcaggctacagccc
gccgaggtgttggttcctactagtgccccggatgtgcggggcctactccgaccaggggaa
agttccccccatttaccccagggcctaccgacgggcttttgctattccctccgctccccc
aaaccctttgatgtcattgaggctaaacagaaactcttgaccatctttcggattcgctcc
ctagagggcctgggctgtgagggcctgccgttggcgatccgggccgctgggggcctgctg
gaatacatcgaagaaacccaaaaggcgaatcttgttcccctgcaacccctcaaaacctat
aacctgacggacttcatggtgctagaccaccaaagtcggcgtaacctcgaaattcaccag
acggtgcgcgaaggcagtttttacggttccctcctctgggccttggatcgcacctgtacc
tccatggggggacgggccctacggcgctggctcctgcaacccctactcgaccccaagggc
atccgggcccggcaacaaaccattcaggaattaatcgaacaatcacccctacgccaagac
ctgcggcaagtgctccgtcagatctatgacctggaacgcctcagtgggcgggtcggggcc
ggtagtgccaatgcgcgggatgtgttgggcctggccacctcccttgtccgcctcacggat
ctggctcacctggccagtcagggccaatccccctacctgcgggccctgcacaatattcct
cctgacttggaggaattgggacgctatgtcattgccaatctcgtcgaaaatcctcccctg
cacctcaaggaaggcggtgtgattcggcccggtgtcaacgaggccctagaccagatgcgt
caacggattgaagatgataatcaatggttagccaatctagaagtgacggaacgacagcgt
accggcattagtaacctcaaggtgggctacaacaaaacctttggctattatctcagcctg
ccccgcagtaaggccgagcaggtacccgacaactacatccgcaagcaaaccctggtcaac
gaagaacgctacattacaccggagcttaaggaacgggagagccgcattctgacggcccag
gatgacctcaaccaactagagtacgaaattttcgtggaaattcgcgataaggttgcggaa
aaggttcaacccattcgggaagtggccaaggcggtagcagccctggatgttctatctggc
ctagcggacgtggccatcttccagggctattgttgtcctgagatcagtgcagaccagggc
ctggaaattgttgcgggtcgccatcctgtcgtagagcaaattctcggggccggtttcttt
gtggccaatgacacccatctcggctcacaggccctggaatcccaccccgacctgattatc
ttgacgggccctaatgccagcggcaaaagctgttacctgcgccaagttggcctgattcaa
ctgatggcccaaactggcagttttgtaccggcccggtcggcccgcctcagtatctgcgac
cgcatttttacgcgggtaggggcagtggatgacttggccacgggacaatccacttttatg
gtggaaatgaacgaaaccgccaatattttgaaccatgccaccccccaatccctagtgctc
ttggatgaaattggccggggaactgccacctttgatggtctggccattgcctggtcagtg
gcggaatatctggcgacagccatcaaggctcgaaccatttttgccacccactaccatgaa
ctgaatgaactggcttctatcctggacaacgtggccaattaccaagtcactgtgcaagaa
ctccccaacgacattgttttcctgcaccaagtccaacccggcggtgcggataaatcctac
ggtatcgaagcgggccgcttagccggcctacccaaatccgttatccaacgggcccgccaa
gtgatgggccaaatcgaaaagcacagtaagatcgccgtcggtctgcgcaaaagtaatccc
accaaaaccaaagtccaggacagtgcaacgaaaggactgccccccctccaagccgaacaa
ctggatatttttggtcaagtcacctga
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