Synechocystis sp. LKSZ1: OLK001_27700
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Entry
OLK001_27700 CDS
T10519
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
syns Synechocystis sp. LKSZ1
Pathway
syns00061
Fatty acid biosynthesis
syns00071
Fatty acid degradation
syns01100
Metabolic pathways
syns01212
Fatty acid metabolism
syns02024
Quorum sensing
syns04146
Peroxisome
Module
syns_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
syns00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
OLK001_27700 (fadD)
00071 Fatty acid degradation
OLK001_27700 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
OLK001_27700 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
OLK001_27700 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
syns01004
]
OLK001_27700 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
syns04147
]
OLK001_27700 (fadD)
Enzymes [BR:
syns01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
OLK001_27700 (fadD)
Lipid biosynthesis proteins [BR:
syns01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
OLK001_27700 (fadD)
Exosome [BR:
syns04147
]
Exosomal proteins
Exosomal proteins of breast milk
OLK001_27700 (fadD)
Exosomal proteins of breast cancer cells
OLK001_27700 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
BFM40844
LinkDB
All DBs
Position
3100125..3102038
Genome browser
AA seq
637 aa
AA seq
DB search
MVALIDYSGIQTLPAFWAIVAQKFPQVSAIQDPHGKPALNWSYTELYENLQQFAAGLQQL
GLAANDRIAIFADNSPRWLVADQGSLLAGAINVVRSSQAEREELRYILQDSGSTALIVED
AKTLAKLQLTSEQFPLKFVVLLSDEAPPTEGPFPLVNFQQVLEQGQGQTLLPSPQDENSL
ATLIYTSGTTGQPKGVMLSHGNLLHQVRELKAILQPQPGDRVLSILPSWHSYERSAEYFL
LSQGCTQIYTSIRTFKNDLKKFKPQHMVGVPRLWESLYEGIQKQFREQSAQQQRVINFCF
TLSKRYILARRISQNLSLGHLHPSGSEKVWAQLQTFLLAPLHGLADKIVYRKIRAATGGE
VKTLISGGGSLARHLDDFYEIVGIPLLVGYGLTETSPVTNARTPQRNLRYSAGQPIPGTE
IRIVDPETLQVLQPEQRGLVLIRGPQVMQGYYGKPEATAKAIDPEGWFDSGDLGWVTKQG
DLVLTGRAKDTIVLSNGENIEPQPIEDACVRSAYIDQIMLVGQDQKFLGALIVPNLEALQ
QWARQSNLTLHLAAQEASPTDWESSDFYRPEVVNLFREELNREVKNRPGYRADDQIKAFR
LVLEPFSMDNGMMTQTLKIKRPVVTERYRGMIERMFE
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atggttgctttaattgattattctggtattcaaactttgccggctttttgggcgattgtg
gcccagaaatttccccaggtttctgccatccaagacccccacggcaaaccggccctgaat
tggagctacactgaactctacgaaaacctacaacaatttgctgctggcctacagcaactc
gggttggcggccaacgataggattgccattttcgccgataatagtccccgctggctcgtg
gcggatcaaggaagcctcttggccggggccattaatgtagtgcgttcatcccaggctgag
cgggaggaattacgctacatcctccaggacagcggcagtacggccctgattgtagaagat
gccaaaaccctagccaaactccagttaacatcggagcaatttcccctcaagtttgttgtt
ttattatcggatgaggccccaccaacggaaggccctttccctctggttaatttccaacag
gtgctagaacagggccaaggccaaactttacttccttctccccaggatgaaaattccctg
gcaactctcatttatacgtcgggaacgaccggccaacccaagggcgtcatgctttcccac
ggcaacctcctgcatcaagtccgagaactcaaggcgattcttcaaccacaacccggtgac
cgggtactcagtattttgccctcctggcattcctacgaacgcagtgcggaatattttcta
ctgtcccagggctgtacccagatttatactagcatccgtaccttcaaaaacgacctcaaa
aaatttaagccccagcacatggtcggagtcccgcgcctatgggagtccctctacgaaggc
attcaaaagcaattccgggaacaatcggcccaacaacaacgagttattaatttctgcttt
accctctctaaacgttacatcctggcccgccgcattagccaaaatctgagtttaggacat
ctccacccttcgggcagtgaaaaagtctgggcccaattgcaaacgtttttactagcgccg
ctccatggtctcgccgataagattgtgtaccgcaaaattcgtgccgccaccggcggggaa
gtgaaaaccctaattagtggcggtggttccctggcccggcacttggatgatttttacgaa
attgttggtattcccttgctagtaggttacggcctcacggaaacctcaccggtcaccaat
gcccgcacaccccaacgcaacctccgctattctgcgggccaaccgattcccggcaccgaa
attcggattgtcgatcccgaaacccttcaagtcctacaaccggaacaacgcggcctagtg
ctcattcgtggccctcaagtcatgcaggggtactatggtaaaccggaagccacggccaag
gccattgacccagagggctggtttgatagcggtgacctcggttgggtgacgaaacagggg
gatttggtactaacaggtcgagctaaggatacgattgtgctgagcaatggcgaaaacatc
gagccgcaacccatcgaggatgcttgtgtccgtagtgcctacatcgatcaaattatgctc
gtgggccaggatcaaaaattcctcggggccttgattgtgcctaatttagaggccctacag
cagtgggcccgacagagcaatctcacgctccatcttgcggctcaggaggcctcaccaaca
gactgggagagtagtgatttctatcggccagaagttgtcaatctcttccgagaagaatta
aaccgggaggtcaaaaatcggccaggctatcgcgctgatgaccaaattaaggccttccgt
ctggtactcgaacccttttcgatggacaacggcatgatgacgcaaacccttaaaatcaaa
cgtccagttgtgaccgaacgctatcgcggtatgattgagcggatgtttgaatag
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