Synechocystis sp. LKSZ1: OLK001_27790
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Entry
OLK001_27790 CDS
T10519
Symbol
ycf56
Name
(GenBank) hypothetical protein YCF56
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
syns Synechocystis sp. LKSZ1
Brite
KEGG Orthology (KO) [BR:
syns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
syns03016
]
OLK001_27790 (ycf56)
Enzymes [BR:
syns01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
OLK001_27790 (ycf56)
Transfer RNA biogenesis [BR:
syns03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
OLK001_27790 (ycf56)
Prokaryotic type
OLK001_27790 (ycf56)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
BFM40853
LinkDB
All DBs
Position
complement(3110904..3111881)
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AA seq
325 aa
AA seq
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MEITFLGTSSGVPTRSRNVSSIALRLPQRAEVWLLDCGEGTQHQLLRSDVKISQLTRIFI
THLHGDHIFGLMGLLASCGLAGVGQGIELYGPPGLADYLKACCKYSATHLINRIRVNTIE
GDGLLYEDDEFRVSCGLLKHRIPAYGYRIEEKDRPGRFRVEEAQGLGIPSGPLYGKLKRG
ETITLADGRRIQGSQLCDPTEPGRKLAYCTDTVFCDGAVQLAQGVDVLIHEATFAHQDAE
MAFERLHSTSTMAAQVALLAQVRELIMTHFSPRYAPGNSLQLEDLLAEAQAIFPNTRLAK
DFLCYEIPRQRVKGAHAQPLATPLA
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
gtggagattacttttttaggaaccagttctggtgtccccactcgttcacgcaatgtgtcg
agtatcgccctgcgtttgccccagcgggccgaagtttggctcttggattgtggcgaaggc
acccagcaccagttactccgcagtgatgtcaaaatctctcagttgacccggatttttatt
acccatctccatggggatcatatttttggactgatgggcctgttagccagttgtggcctc
gccggggttggtcaaggcattgaactctatggcccgccgggcctagcggattatcttaag
gcctgttgcaagtattccgccacccatctcatcaatcgcatccgggtcaacaccattgag
ggggacggcctgctgtacgaagatgacgaatttcgggttagctgtggtctgttgaagcat
cgcatcccggcctacggttatcgcattgaagaaaaagaccgtcccggccgctttcgggta
gaagaggcccagggcttgggtattccctccggcccactctacggcaaactgaaacgaggc
gagaccattacccttgccgacggccgacgtattcaggggtctcaactgtgtgatccgacg
gaaccgggacgaaaactggcctattgtaccgataccgtattttgtgatggggccgtccag
ttggctcagggggtcgatgtcctaatccatgaggcgacctttgcccatcaagacgctgag
atggcctttgagcgtttgcattccacctccaccatggcggcccaggtggcgctgttggcc
caggtacgagagctgattatgacccacttcagcccccgctatgctcccggtaattctctg
caattagaagatctgcttgcagaagcccaggccattttccctaatacgcgattagccaag
gattttctctgctacgaaattccccgtcaacgagttaagggggcccacgcccaaccccta
gccacccctctcgcctag
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