Synechocystis sp. LKSZ1: OLK001_31230
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Entry
OLK001_31230 CDS
T10519
Name
(GenBank) WD-repeat protein
Organism
syns Synechocystis sp. LKSZ1
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
EIF3I
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_TEP1_C
ANAPC4_WD40
eIF2A
Beta-prop_WDR35_TULP_N
Ge1_WD40
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_NWD2_C
Beta-prop_Vps41
Beta-prop_Nup120_160
Cytochrom_D1
Beta-prop_SPT8
PEP5_VPS11_N
AAA_16
Motif
Other DBs
NCBI-ProteinID:
BFM41197
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All DBs
Position
complement(3494141..3499030)
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AA seq
1629 aa
AA seq
DB search
MTPLLTFLLRWPQPQQEWATLQTRLQESPALDHAYFVRTPRPRAILTEFQGMLTQEAQML
DLSQGTETDGGLALTLEAPPRVLLLVGLEDCAQPQEALARIAQAKEKTYPEQAFHWVIGL
TPGIEAEFRGLLSFLGGTSSWVDSCLGGESLDQALAAAIADYWRPHCHWDDELADRIYQL
QGTMVPLAELTPAQQAHFSLLQGLYYEKIQQWGGLDPSLPSAVYYYHQSLVCFQQLEDRA
EVTWVSLRLAYVYLLQAWSEKDRGHFLWQATQEAVSIAMAALQERDWRDCRNDTLILLAT
ILRGLESWQYLQQCAEHFLVFFYQLSPLITGAEPKHGDCPWSRSQLALQTAMAYGLLTEA
LIEQWRFTEAKESLQRAWESLPPEPSITPVWQSWLHYLAGRCLLGEEQLEAAQESLELAK
QLACLEDNPHFFSGILIELRECYYQAQQWQQVLAIDQEYQALEYQIGKRAFIGSYPLGPE
PLARMKRHPLGVPLADSQPELPPPLPLFPALSLADWLATDTPLLLLSGEVGMGKSSWLTC
HLFPELQEHYSHQCPLLLPIDPEWESKLLEHFQVETLNQSLASLESTVLLLDGDPEACPP
SLVSFLCRGLAQKSLKILIALPPLALTTVIDRLGTGIPLPAFQHLRFPPIPKSYFQAYLQ
QVKADLGWDADLQAQVLEDLSDSHQCIVPLDWQRLGSELEERQITSLEAYQALGRDKLYW
YRIERLLTPLPMALQTLAKEILQRLAESSPLPSLRTATELLAPESSQGHLMLQCLEQLRL
VVAVPLGDTTYYRLSTPLLTQVLAQLPSPEPPESLTSPATPEPDWPLYFPEGSEAIDGIQ
RLRRQLTHTEQAYQKLLVGLRLERQSQIILRQAEFQPIEALLAALSLGQELRSLLPAEPG
VSHYPSLGPLLALQQILGQIHERNRLEHPVAVSSLCLHPEGHTLATGSTEGVVRIWATTG
ELYHVLRGHQGDITSLHWSPQGDYLLSGSSDHTARLWNRQGQLQTTLQGHQKAVRSVRFS
PVAALLLTSSRDGTVRLWNFAGEEQAQCQGHQHWVRNAEFSADGQQILSASRDGTARLWD
LQGQELQVFRGHQNWVRNAQFSPDGQRILTASTDTTARIWDLSGHCLAILKGHYNWVRNA
QWSPDGELVLTASSDGTARLWNQEGKTVAILSAQQQAVYDASFSPDGQSIVTLANDGTVR
LWQRSGQLLAVMRGHQKEVYEAQFSQDSRRLFTISADHSARVWDLSEKSATVLKGHSNWV
RNAHFNSQGDRILTVSRDHTARLWSDQGRCLATLESHHDWIREGQFSPDGHFIATASADK
NTQLWNSAGKRLATLRGHQDAVLSVRFSPDSQFVLTASKDGTARLWNTTGQCLTVLRQQG
QALFSAEFSPDGQFITTASADKSATLWDIVGKELAVCRGHRGAVHTIQFDPQGHYLLTAS
ADHTARLWDLAGQEIAVLTGHQNIVYQAQFSPDGQNIVTASADRTARIWNRQGQELVALY
GHQAFVNTAQFSPDGQIIVTASTDGTARLWDLLGRELAIFRGHSGWVRSAEFSPDGRWVV
TASTDGTARLWPVDNLDQLLDRGCQWLEDYLNHNPSVPEKDKQLCVVKLTINMEIPKTLQ
ENPSLSTGA
NT seq
4890 nt
NT seq
+upstream
nt +downstream
nt
atgacccccctcctcacctttttgttacgttggccccagccccagcaagaatgggcaacc
ctgcaaactcgtctccaggaatcaccggccctagaccatgcctattttgtgcggactccc
cgccctcgggctattctgacggaatttcaggggatgttgactcaagaggctcagatgctt
gatctgagtcagggaacggaaaccgatggcgggttggcgctgaccctggaggctccccct
cgggtgttgttactcgtcggcctagaagactgtgctcaaccccaggaagccttggcgcga
atagcccaagccaaagaaaaaacctatcctgagcaggcgtttcactgggtgatcggtcta
acccctggcattgaagcggaatttcggggcctactctcttttttggggggaaccagttcc
tgggtggatagttgcctcgggggagagagtctagaccaggccctggcggcagccattgct
gattattggcggccccactgccattgggatgacgagctcgctgataggatttatcaactc
caggggacaatggtaccgctggcggaactcaccccggcccagcaggcccatttcagtttg
ctccagggcctgtactatgaaaaaatacagcagtggggaggattagatcccagtctgccc
agtgcggtttactattaccaccaaagcctggtctgttttcagcaactggaagaccgggct
gaagtcacctgggtgagcctccgcttggcctacgtctacctgctccaggcctggtcggaa
aaagaccggggacattttctctggcaagcgacccaagaggcggtttctatcgccatggcg
gctctccaagagcgagattggcgggattgtcgcaacgataccttaatcctactggcaaca
attctacggggtctggaaagttggcaatatctccaacagtgtgcagaacattttttagtc
tttttttatcaactctctcccctgatcacaggggccgaaccgaagcacggggactgtccc
tggtctcgttcccaactggccctgcaaacggcgatggcctatggcctgttaacggaagcc
ttaattgaacagtggcgctttacggaagcgaaggaatctctccagcgggcctgggaaagt
ttacccccggaacctagcattaccccagtttggcagagttggctccattatctggcgggg
cgctgtcttctgggagaagagcaactggaagcggcccaggaaagtctggaattggctaag
caattggcttgtctagaagataatccccatttcttttcaggcattttaatcgaactgcgg
gaatgctactaccaagctcagcagtggcaacaggttcttgccattgaccaggaataccag
gccctggaataccagattggcaagcgggcctttatcggtagctatccactagggccagag
ccgttggcccggatgaaacgtcatcccctcggtgttcccctcgccgactcccaaccggag
ctccctccccccctccccctattcccggccctatccctggcggattggctggcaacggat
acgcccttgcttctactgtctggggaagtcgggatgggtaaaagctcttggctgacctgc
catttgttcccagaactccaggaacactactcccaccaatgccccttgctcttgccaata
gatcctgagtgggagagcaagcttttagaacactttcaggtcgaaaccttgaaccaaagt
ctagcctctctggagtctacggttctcctgctggatggcgacccagaggcctgcccccca
tcattggtttcttttctttgccgggggttggcccaaaaaagtctaaagattctcattgcc
ctacccccgctggccctgacaacggtgattgaccgtctgggcaccgggattcccctcccg
gcctttcaacatcttcgttttccaccgattcccaagtcctactttcaagcctatctccag
caagttaaagcggatctgggctgggatgctgacctccaggcccaagtccttgaggatttg
agtgatagccatcagtgcattgtgcccctcgattggcaacgcctcggcagtgagctggaa
gaacggcagatcacgagtctggaagcttaccaggccctggggagagacaaactgtattgg
tatcgtattgagcgtctactgactcccctgcccatggccctccaaaccctggccaaggaa
atattacagcgcttagcagaatcttcgccgttaccgagcctgcgaacggctacggaactc
ctggctccagagtcttcccagggccacctgatgctccagtgccttgaacaattacggtta
gtggtggctgttcccctgggagataccacctattaccggctcagtaccccattgctgacc
caggtactggcccaactcccctcccctgagccccccgaatccctcaccagtcccgcgact
ccggaaccggactggcccttgtattttcctgagggctccgaggccattgatggcattcaa
cgcctacgtcgtcagttgacccacactgagcaggcctatcagaaactcttagtgggccta
cgcctcgaacgtcagtcccagattatcctccgacaagcggaatttcagcccattgaggcc
ctgttagccgccttaagtctgggccaagaactgcgttccctcctccctgcggagccgggg
gtgagtcactaccccagtctcgggccgctactggcattgcaacaaattttgggacaaatc
catgagcggaatcgtttagaacatccggtggccgtatcttccctctgtttgcatcccgag
ggccataccctcgccacgggaagcaccgaaggcgttgtgcggatctgggccacaacgggg
gaactgtaccatgtcctgcggggccatcagggggatattactagcctccactggagtccc
cagggggattatctcctcagtggctctagcgaccacacggctcgtctgtggaaccggcag
ggccaactccagaccaccttgcaagggcatcaaaaagccgtgcgcagcgtccggtttagc
ccggttgctgcgctactgctcaccagtagccgggatggcaccgtgcggctgtggaatttt
gcaggagaagaacaggcccaatgtcagggccaccaacactgggtgagaaacgcagaattt
agcgccgatggccaacagattctctccgcctctcgggatggtacggcacggctctgggat
ttgcagggccaggaattacaagtctttaggggccatcaaaattgggtacgcaatgcccag
tttagtccggatggccagcggattctcaccgcttcgacggataccaccgcccggatttgg
gatttgtctggccattgtctggccattctgaagggccactacaattgggtgcgcaatgcc
cagtggagtcccgacggggaactggtgctaacggcctctagtgatggtacagctcgcctg
tggaaccaagaaggtaagacagtggcaattctctcggcccaacagcaagcggtctatgat
gccagttttagccccgatggccaatcgattgtcaccctcgccaacgacggcactgttcgg
ctctggcaacgttccggtcaactactagctgtgatgcggggccaccaaaaagaagtctat
gaagcccaattcagccaggatagtcgtcgtcttttcactatttccgccgatcattccgcc
cgcgtttgggatctgtcggaaaaaagcgctacggttctcaagggccacagcaattgggtt
cgcaatgctcacttcaatagccaaggggatcgaattttaacggtatcccgtgaccatact
gcccgtctctggagtgatcaaggtcgctgtttagcaacccttgaaagtcaccatgactgg
attcgagagggccaatttagtcccgatggccattttattgccaccgcctccgctgataaa
aatactcaactgtggaactctgccggcaagcgattagcgaccctccgcggccatcaggat
gcggttttaagtgtccgcttcagcccagatagccagtttgtgctgacggcgtccaaggac
ggcaccgcccgcctttggaacacgacaggccagtgtttgacggtattacgacaacagggg
caagcattatttagcgcggaatttagccccgatggccagtttattacgaccgcttctgcc
gataaaagcgccacgctgtgggacattgttggcaaagaattagccgtctgtcggggacac
cgaggggccgttcataccattcaatttgatccccagggccattacttgctcacggcttcc
gccgaccatactgctcgattatgggacttggcgggccaggaaatcgccgtgctgacgggc
catcaaaatattgtttaccaagcgcaatttagccccgatggccaaaacattgtcaccgct
tccgctgaccgcaccgcccggatttggaatcgccagggccaggagttggtggctctctat
ggccatcaagcctttgtcaatacggcccaatttagcccggatggacagatcattgtgacg
gcctctacggatggcacggctcgtctgtgggatctcctaggacgagaattggctatcttt
cgcggccacagtggttgggtgaggagtgcggaatttagtcccgatggtcgttgggtcgtc
accgcttccaccgatggcacggcacgcctctggcctgttgataacctagaccaactccta
gaccggggttgtcagtggctagaggattacctcaaccacaatccctcggttccggaaaag
gataaacaactctgtgtcgttaaattgaccattaatatggaaattcccaagacgttgcag
gaaaatccgtcgttatccacaggtgcttga
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