Synechocystis sp. LKSZ1: OLK001_32580
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Entry
OLK001_32580 CDS
T10519
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
syns Synechocystis sp. LKSZ1
Brite
KEGG Orthology (KO) [BR:
syns00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
syns03016
]
OLK001_32580
Enzymes [BR:
syns01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
OLK001_32580
Transfer RNA biogenesis [BR:
syns03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
OLK001_32580
Prokaryotic type
OLK001_32580
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
BFM41332
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All DBs
Position
complement(3639466..3640347)
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AA seq
293 aa
AA seq
DB search
MFGFLNLNKPLHWTSHDCVAKVRRLLREKRVGHGGTLDPLASGVLPIAVGRATRLLNYLP
TRKVYRAKIRFGLQTSTDDLAGTILQDTNASGLSLQAVEAQLPSFLGQITQIPPQYSAIQ
VNGQRLYDLARAGKMVEVPSRQVEVFALDVLDWQGGQAPELTLQVACGEGTYIRAIARDL
GQALGVGGTLAGLERLESGGMRLDQGITLEQLADSENPENLLQSAVTVLAHLPQHHLGEQ
ETRFWFQGKSLPLSSPIEPTYLMLDDQGNCVGIGHRRETESGWFLQPKVVLAP
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgtttggatttttgaatttgaataagcccttgcactggacgtcccacgactgtgtggcc
aaggttcgacgactactgcgggaaaaacgggtgggccacggtggaaccttagatccgtta
gcatccggggttctgcctatcgcggtgggcagggccacgcgcttgctcaactacctcccg
acacgcaaggtgtatcgcgctaaaattcgctttggcctacagaccagcaccgatgattta
gcgggtaccattctccaggacaccaacgcctcgggcctgagcctccaagcagtagaagcc
cagttaccctcatttctaggccaaattactcaaatccccccccaatacagcgccattcaa
gtgaacggccaacgtctctacgatttagcccgagccgggaaaatggtggaagtgcccagt
cgccaggtggaggtgttcgccctggatgttttggattggcaagggggccaggccccggaa
ttgaccttacaggtggcctgtggcgagggaacctatatccgggccattgctcgagatctc
ggccaggccctgggggtgggaggaaccttagcaggcctggaacgcctagagagcggcggc
atgcggttagaccaaggcattaccctagaacaactagcagatagtgaaaatcccgaaaat
ttactccagtctgccgttacggtattggcccatctgccccagcatcatctgggggaacag
gaaacccggttttggtttcagggcaagagtctgccgctctcctccccgatagagccaact
tatttgatgttggacgatcaaggcaattgtgtcggtattgggcaccggcgagagacagaa
agcggctggtttctgcaacccaaggtggttttagcgccttga
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