Synechococcus sp. WH 8101: SynWH8101_0961
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Entry
SynWH8101_0961 CDS
T10836
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
synu Synechococcus sp. WH 8101
Pathway
synu03018
RNA degradation
Brite
Enzymes [BR:
synu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SynWH8101_0961
Messenger RNA biogenesis [BR:
synu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SynWH8101_0961
Ribosome biogenesis [BR:
synu03009
]
Prokaryotic type
rRNA helicases
SynWH8101_0961
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Gene cluster
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Other DBs
NCBI-ProteinID:
QBE68550
LinkDB
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Position
complement(937687..939522)
Genome browser
AA seq
611 aa
AA seq
DB search
MTQSATHGSELSCSVDLSAATIDDAPPASVTNAASGSEDPLFTTVINNPQDAASGFDGFG
FSEALLRTLASKGYQEPSPIQRAAFPELMLGRDLVGQAQTGTGKTAAFALPLLERLQSEG
PGPQVLVLAPTRELAMQVAESFKAYAAGHPHLNVLAIYGGSDFRSQIHSLKRGVDVVVGT
PGRVMDHMRQGTLNTSHLRSLVLDEADEMLRMGFIDDVEWILDQLPEERQVVLFSATMPA
EIRRLSKRYLREPAEITIKTQEKEARRIRQRCITLQNSHKLEALNRVLEAVTGEGVIIFA
RTKAITLTVSENLEAAGHDVAVLNGDVPQNQRERTVERLRKGTVNILVATDVAARGLDVE
RIGLVINYDMPFDSEAYVHRIGRTGRAGRSGEAILFVTPRERRFVNNLERATGQPIEPMQ
IPSNAEINQARLDNLRQKLTAVANGDGAERQADEGPLLQELLQRVAQEHSLSMEQLALAA
LTLAVGDQPLLVQGDESWLQNANRGRTREDRLSSRGGERGDRRRQERPSRPPEDNMERFR
VEVGHRDRVKPGNLVGAIANESGLQGRMIGRIQIFESHSLVDLPKGMPQDVFQSLKRLKV
MNRELQIRPFT
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgacccagagtgcaacgcacggcagtgagctgtcgtgttcggtggatctcagcgccgcc
acgatcgacgacgcccctccggccagcgtgaccaatgcagcgtcgggctcggaagatccc
ctcttcaccaccgtgatcaacaacccgcaggatgcggcgtcgggctttgacggctttggc
ttcagtgaggcgctcctgcgcaccctggccagcaagggctatcaggaaccttcaccgatc
cagcgggccgcctttcccgagctgatgctgggccgggacctggtgggacaggcccaaacc
ggcaccggcaagaccgccgccttcgccctgcccctgctcgagaggctgcagtcggaggga
ccgggcccccaggtgctggtgctcgctcccactcgggaactggccatgcaagtggccgag
tcgttcaaggcctatgcagccggccatccccacctgaatgtgctggcgatctacggcggt
tccgacttccgctcccagatccacagcctcaagcgtggggtggatgtggtggtgggcacc
ccggggcgagtgatggatcacatgcgccagggcacgctgaacaccagccatctgcgcagc
ctcgtgctcgatgaagccgatgaaatgctgcgcatgggtttcatcgacgatgtcgaatgg
atcctcgatcagttgccagaagaacgccaggtggtgctcttttcggccacgatgccggcc
gaaattcgtcgcttatccaagcgctatctgcgcgaaccggcagaaatcacgatcaaaacg
caggaaaaggaagcccgacgcatccgtcaacgctgcatcacgctgcagaacagccacaag
ctggaagcgctcaaccgtgtactggaggcggtcaccggcgaaggggtgatcatttttgcc
cgcaccaaggcgatcactctcacggtgtcggaaaacctggaggcggccggtcatgacgtc
gccgtcctcaacggtgatgtgccccaaaatcagcgggagcgcacggtggagcgcctacgc
aaaggcacggtgaacatcctggtggccaccgatgtggcagcacggggcctggatgtggaa
cgcatcggcctcgtgatcaattacgacatgcccttcgacagtgaggcctatgtgcaccga
atcggtcgcaccggccgggccggtcgcagcggtgaggcaattctgtttgtcacgcctcga
gagcgccggtttgtcaacaacctcgagcgggcaaccgggcaaccgatcgagccgatgcag
atcccgagcaatgccgagatcaatcaggcccggctcgacaatctgcgccagaaactgacg
gccgtggccaacggtgatggcgctgagcgccaggcggatgaaggccccctcctgcaggaa
ctgctgcagcgcgtcgcccaggagcacagcctgagcatggagcaactcgccctggccgcc
ctcaccctggcggtgggcgaccagccgctgctcgtgcagggagatgaaagctggctacag
aacgccaaccgcggccgcacgcgcgaagatcgactcagcagccgtggcggcgaacgcggc
gaccgacgtcggcaggagcgcccctcccgaccacccgaagacaacatggagcgattccgt
gtcgaggtgggccatcgcgaccgggttaaaccaggcaacctggtgggggcgatcgccaat
gaatccggtctgcaggggcggatgatcggccgcatccagatcttcgaatcccacagcctg
gtggacctgcccaaagggatgccccaggatgtgtttcagtccctgaagcgcctgaaggtg
atgaacagggaactgcagatccgcccgttcacctga
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