Synechococcus sp. WH 8101: SynWH8101_1293
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Entry
SynWH8101_1293 CDS
T10836
Name
(GenBank) hypothetical protein
KO
K03086
RNA polymerase primary sigma factor
Organism
synu Synechococcus sp. WH 8101
Brite
KEGG Orthology (KO) [BR:
synu00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SynWH8101_1293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
synu03021
]
SynWH8101_1293
Transcription machinery [BR:
synu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SynWH8101_1293
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Chlamy_scaf
Motif
Other DBs
NCBI-ProteinID:
QBE68879
LinkDB
All DBs
Position
complement(1196452..1197342)
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AA seq
296 aa
AA seq
DB search
MLDTVTCWLQAAGREPRLTDEELIILSRTIQSSSSGKASKRAGQRALDRVIRANLRLIVT
VMRKRFSWISLRGPLAADCLQEGSIGLRSAALKYQHQKGYRFSTYAAQWIAKEIGEFLRD
RHRMIRVPVDCHSVAYTARKLAARSAARNGTGGPIVLEEVANSLQKPLDTVRQYLQAFRS
TDCMSANQQVQSEEGQELLQFLADPHQDYDEQQDQRAERIGTVLQAVFDGLGLSARERAI
VCKRQLYTVPVTFRELGRTYGVTSAAIRCQYHRLMERIQSQLQRADVSLTHILSEV
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgcttgacaccgtcacctgctggctccaggccgctggacgcgaaccgcgtctcaccgac
gaggagctgatcatcctcagccgcaccatccagagcagcagcagcggcaaagcgtccaaa
cgcgctgggcagcgggctctcgatcgggtgatccgcgccaacctgcgcctgatcgtcacc
gtgatgcgcaagcgcttctcctggatcagcctgcgcggacccctcgctgccgattgcctc
caggaaggcagcatcggcctgcgcagcgccgccctcaaataccagcaccagaagggctat
cgcttctccacctacgccgcccagtggatcgccaaggagatcggcgaattcctgcgcgat
cgtcatcgcatgatccgggtgccggtcgattgccacagcgttgcttacaccgcccgcaag
ctcgctgcccgctccgcagcacgcaacggcactggaggcccgatcgtcctggaggaggtg
gccaacagcctgcagaagcccctggacaccgtgcggcagtacttgcaggcgttccgcagc
accgactgcatgagcgccaaccaacaggtccagtcagaggaaggccaggagttgctccag
ttcctggcggacccgcatcaggactatgacgagcagcaggaccagcgcgccgagcggatc
ggcacggtcctgcaggcggtgtttgatggccttggtctcagcgccagggaacgggcgatc
gtctgcaaacggcagctctacacggtgccggtcaccttccgggaactgggcaggacttat
ggcgtcaccagcgcagcgatccgctgccagtaccaccggctgatggagcggatccagagc
cagctgcagcgggccgatgtttccttgacccatatcctgtcagaggtctga
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