Synechococcus sp. WH 8101: SynWH8101_1744
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Entry
SynWH8101_1744 CDS
T10836
Name
(GenBank) hypothetical protein
KO
K03086
RNA polymerase primary sigma factor
Organism
synu Synechococcus sp. WH 8101
Brite
KEGG Orthology (KO) [BR:
synu00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SynWH8101_1744
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
synu03021
]
SynWH8101_1744
Transcription machinery [BR:
synu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SynWH8101_1744
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_ECF
Phage_antitermQ
Sigma70_r4_2
HTH_10
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
QBE69326
LinkDB
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Position
1612397..1613263
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AA seq
288 aa
AA seq
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MANIRPAQPMRDGAVTLILNGAGRQPIPTKAEQLHLARLIRQGQAVGASRSQARAGQRAC
QRLMSGNVRLAVAIARGFMPRLGQGSSLEFADLIQEAIIGLHTAAQRFDPERGCSFSTYA
VWWCRQSVHRLIQGQAHTIRLPAHVQDLERRWNLRPPGQNLEQFCEQWHTTPEAMQGVLT
LVHQARTRSIDAAGGEQEREGMSLAERLSVAASDPLDALDRNLLLDRLAAALPEELALVE
RHVVKQHTTKAMATESAISATAMARRLNRARRKLRDALEPNNRISRQQ
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggccaacattcgcccggcccaaccgatgcgtgatggagctgtgaccctgatcctcaat
ggggctggtcgccagccgatccccacaaaggcggagcaactccaccttgcgcgtctgatc
cggcagggtcaggcggtgggcgcctctcgatctcaggctcgagccggtcaacgggcctgc
cagcgcctgatgagcggcaacgttcgactggcggtggcgatcgcccgcggtttcatgccg
cgcctggggcagggatcgagcctggaattcgccgacctgattcaagaggcgatcatcggg
ctgcacaccgcggcgcaacgcttcgatccggaacgggggtgcagcttcagcacttatgcg
gtgtggtggtgtcgccaatcagtgcatcgcctgatccaggggcaggcccacacgattcgg
cttccggcccatgtgcaagacctggagcggcgctggaatctgcgtccgcccggccagaat
ctggagcagttttgtgagcagtggcacaccacccctgaagcgatgcaaggggtgctgacc
ctcgtgcatcaggccagaacccgcagcatcgatgccgccggaggggagcaggagcgtgag
gggatgagcctggccgaacggctgagtgttgccgccagtgatccccttgatgctctggac
cgcaacctgctgctggatcggctggcagcggccctaccggaggagctggccctagtcgaa
cggcacgtggtgaagcaacacaccaccaaggcgatggcaacagaaagcgccatcagcgcc
acggcgatggcccgccgactgaaccgggctcgcaggaagctgcgggacgcactggagccc
aacaacagaatctcgagacaacaatga
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