Synechococcus sp. WH 8101: SynWH8101_2263
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Entry
SynWH8101_2263 CDS
T10836
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
synu Synechococcus sp. WH 8101
Pathway
synu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
synu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SynWH8101_2263
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
synu03019
]
SynWH8101_2263
03016 Transfer RNA biogenesis [BR:
synu03016
]
SynWH8101_2263
Enzymes [BR:
synu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SynWH8101_2263
Messenger RNA biogenesis [BR:
synu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SynWH8101_2263
Transfer RNA biogenesis [BR:
synu03016
]
Prokaryotic type
tRNA degradation factors
SynWH8101_2263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
S1_RRP5
PCB_OB
KH_KhpA-B
DUF3586
Motif
Other DBs
NCBI-ProteinID:
QBE69841
LinkDB
All DBs
Position
2048047..2050212
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AA seq
721 aa
AA seq
DB search
MQGQTQSISFDGREIRLTTGRYAPQAGGSVMIECGDTSVLVTATRSSGRDGIDFLPLICD
YEERLYAAGRIPGSFMRREGRPPERATLISRLIDRPMRPLFPNWLRDDLQIVATCMSLDE
RVPADVLAVTGASMATLLAGIPFHGPMAAVRVGLLGDDFVLNPSYREIERGDLDLVVAGT
PEGVVMVEAGANQLPEQDVIEAIDFGYEAVCELIKAQQEILKQAGIEQVIPPAPEQDATL
PTYLEKQCSKPIGEVLKQFEQSKADRDAKLDAIRASTAETIQGLKEDDPVRQAVSANSKA
LPASFKALTKKLMRQQILKDGKRVDGRGLDEVRPISAAAGVLPKRVHGSGLFQRGLTQVL
STATLGTPSDAQEMDDLNPSTEKTYLHHYNFPPYSVGETKPMRSPGRREIGHGALAERAI
LPVLPAKDTFPYVVRVVSEVLSSNGSTSMGSVCGSTLALMDAGVPLKSPVSGAAMGLIKE
GDEVRILTDIQGIEDFLGDMDFKVAGTDKGITALQMDMKITGLAVSTVAEAVNQARPARL
HILEKMMQAIDTPREGLSPHAPRLLSFRIDPELIGTVIGPGGRTIKGITERTNTKIDIED
SGIVTIASHDGAAADEAQKIIEGLTRKVNEGEVFSGAITRIIPIGAFVEILPGKEGMIHI
SQLSEARVEKVEDVVKVGDEVTVRVREIDNRGRINLTLRGVPQNGEDAEPEPAPTPVAPL
T
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
gtgcaaggacaaacccagtcgatctcctttgatggacgggagattcgactgaccacaggg
cggtatgccccccaggccggcggctcagtgatgatcgagtgcggcgacacttcggtgctg
gtcaccgccacccgatcgagcggacgcgatggtatcgatttcctccccctcatctgcgac
tacgaagagcggttgtatgccgccggtcgcatccctggaagcttcatgcgccgggagggc
cgtcctccagaacgagccaccctcatctcccgactgatcgatcggcccatgcggcccctg
ttcccgaactggctccgggacgacctgcagatcgtggccacctgcatgtcattggatgag
cgggttcccgctgatgtgctggcggtgacaggcgcctccatggccaccctgctggcaggc
attcccttccacgggccgatggctgccgtgcgtgtggggttgctcggcgatgacttcgtg
ctcaaccccagctacagggagatcgaacggggtgacctggatcttgtggtggctggcacc
cctgagggtgtggtgatggtggaagccggcgcgaaccagctccccgaacaagatgtgatc
gaagcgatcgatttcggctacgaggcggtctgcgaactgatcaaggcgcaacaggagatt
ttgaaacaggccggcattgagcaggtcatccccccagcccccgaacaggacgccacgctt
cccacctacctggagaagcaatgcagcaagccgatcggcgaggtgctcaagcagttcgag
cagagcaaggccgaccgggacgccaagctcgatgcgatcagggcttccacggccgaaacg
atccagggcctcaaggaggatgacccggtccggcaggccgtgagcgccaacagcaaggcc
ctgccggcgtcgttcaaagcgctcacgaaaaagctgatgcgccagcagatcctcaaggat
ggcaagcgcgtcgacggccgcggtcttgatgaggtgcggccaatcagcgccgccgccggc
gtgctgcccaagcgcgttcacggctccggcctgttccaacggggtctcacccaggtgctc
tccaccgccactttgggcaccccgagtgacgctcaggagatggacgatctcaatccgagc
acggaaaaaacctatctccaccactacaacttccctccttactcggtcggtgagaccaag
ccgatgcggtcccccggcaggcgggaaatcggccacggcgccctggctgagcgggcgatc
ctgccggtgctgcccgcgaaggacaccttcccctacgtggtgcgtgtggtgagtgaagtg
ctcagctccaacggctccacctccatgggctccgtctgcggtagcactctcgccctgatg
gatgctggcgttcccctcaaatcacccgtgagcggcgccgccatgggattgatcaaagaa
ggcgatgaggtgcgcatcctcaccgatatccagggaattgaggatttccttggcgacatg
gatttcaaggtggcgggcaccgacaagggcattaccgcgcttcagatggacatgaagatc
accggactggcggtgagcacggtcgccgaggccgtgaaccaggccaggccggcacggctg
cacatcctcgagaagatgatgcaggcgatcgataccccccgggagggcctctccccccat
gctccgcgactgctcagtttccgcattgaccctgagctgatcggcacggtgattggccct
ggcggccgcacgatcaagggaatcaccgaacgcaccaacaccaagattgacatcgaagac
agcggcatcgtcaccatcgcctcccatgacggggcggcggcagacgaggcacagaaaatc
atcgaaggactgacccgcaaggtgaacgaaggcgaggtgttcagtggcgcgatcacccgg
atcattcccattggtgcctttgtggaaatcctgcccggcaaggaagggatgatccacatc
tcccagctctcggaagcacgggtcgagaaggtggaagacgtggtgaaggtgggcgatgag
gtgacggtgcgtgtccgtgaaatcgacaatcgcggccgcatcaacctcaccctgcggggc
gtccctcagaacggcgaagacgctgaacccgaaccggcccccacccccgttgcgcccctg
acctga
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