Synechococcus sp. WH 8101: SynWH8101_2306
Help
Entry
SynWH8101_2306 CDS
T10836
Name
(GenBank) HAMP domain-containing protein
KO
K07769
two-component system, OmpR family, sensor histidine kinase NblS [EC:
2.7.13.3
]
Organism
synu Synechococcus sp. WH 8101
Pathway
synu02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
synu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SynWH8101_2306
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
synu01001
]
SynWH8101_2306
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
synu02022
]
SynWH8101_2306
Enzymes [BR:
synu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
SynWH8101_2306
Protein kinases [BR:
synu01001
]
Histidine kinases
OmpR family
SynWH8101_2306
Two-component system [BR:
synu02022
]
OmpR family
NblS-NblR (photosynthesis)
SynWH8101_2306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
HisKA
HAMP
PAS
PAS_4
PAS_8
dCache_3
dCache_1
PAS_9
HAMP_2
Motif
Other DBs
NCBI-ProteinID:
QBE69882
LinkDB
All DBs
Position
2092862..2094919
Genome browser
AA seq
685 aa
AA seq
DB search
MASSASAASATGSPAASTATSWWGKVRLWWAEFSLQTKLLSVATLVVSLMMTGITFFALN
GIQRDAVMNDTRYARDLGLLLAGNVSELVAEGRDRELANVTESFWRSSRSLRYIFFADPE
GIVYLGIPISGSGQETPNDLQLSRRLELPAGLRNRPQNPLVRQHLTPQGQVTDVFVPLVR
DGRYLGILALGVNPNETALASAALTREVTVAVFISIWVLVILGAVFNALTITRPVKELLR
GVRSIASGDFEARIALPVSGELGELLDGFNAMAAQLQAYDAANIEELTAAQVKQASLIAT
MADGAVLLDAEGRIVLANPTARRLFRWEGRNLESQELLDELPHLLAIELHAPLDALLNGI
SDSEDLRCSIDDPSRTLRIVLQSVRDASGESLKGIAVTIQDLTREVELNAAQSRFISNVS
HELRTPLFNIKSYVETLHDMGDQLSEEETKEFLGVANAETDRLTRLVNDVLDLSRLESNR
PVQFEAMALTPALEQTLRNYKLNADDKQVSLRLDVPVELPEILGNWDLLLQVLDNLVGNA
LKFSRQGGVLMLRAYTWPDSCWMPAARQEESAPHCDLISPLPRVRIEVADTGFGISEADQ
QRIFDRFYRVENAVHTEVGTGLGLSIVRGIVEKHGSTIHMASEPEVGTTFWFDLALAQSD
QDELQLQSDRRKRQELELLEQELSG
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggccagcagcgcatcagcagcatccgcaaccggctcccccgccgcatccaccgcaacg
agctggtgggggaaggtgcggctgtggtgggccgaattcagtcttcaaacgaagctgctg
tcggtggcgacgctggtggtgagcctgatgatgacaggcatcaccttcttcgccctcaac
ggcatccagcgcgacgccgtcatgaatgacacgcgttacgccagggatctgggtctgctc
ctggccgggaacgtgagcgaattggtggcggagggccgcgaccgcgaactggccaatgtc
accgaatccttctggcgatcaagccgcagcctgcgttacatcttcttcgccgaccccgag
ggcatcgtgtatctgggaattccgatcagcggcagcggtcaggaaacgcccaatgacctg
cagctgagtcgacggcttgagctaccggcgggtctgcgcaaccgaccccagaaccctctg
gtgcgtcagcacctcaccccccagggtcaggtcaccgatgtgttcgtgcctctggtgcgc
gatgggcgttacctgggcatcctcgccctgggggtgaatcccaacgaaaccgctctcgcc
agcgccgccctcacccgcgaggtgacggtggcggtgttcatctcgatctgggtgctggta
atccttggggctgtgttcaacgccctcacgatcacccgaccggtgaaggaactgctgcgg
ggcgtccgctcgatcgcctccggtgatttcgaggcacggattgccctgccagtcagtgga
gaactgggggaactactggatggcttcaatgccatggccgcccagctgcaggcctacgac
gccgccaacatcgaggagctcaccgccgcccaggtgaagcaagcgtccctgatcgccacg
atggccgatggcgctgtgctgctcgatgccgaaggacggatcgtgctggcgaatcccacc
gcccgccggctgtttcgctgggaggggcgcaaccttgaaagtcaggagctgctcgatgaa
ctgccccaccttctggcgatcgaactgcatgctcccctcgatgctctcttgaacggcatc
agcgacagcgaagacctccgctgcagcatcgacgatccatcccgaaccctacggatcgtg
ctgcagtcggtgcgcgatgccagcggcgaaagcctgaagggaatcgcggtcaccattcag
gacctgaccagagaagtggaactgaacgcagcccagagccggttcatcagcaacgtgtcc
catgaactgcgcacaccgctgttcaacatcaagagctacgtggaaacgctccacgacatg
ggcgaccagctcagcgaggaggaaaccaaggagtttctgggtgtcgccaacgccgagacc
gatcggctcacacgactggtgaacgatgtgctcgacctctcgcgcctggagtcgaaccga
ccggtgcagttcgaagccatggcgctgacaccggccctggagcagaccctgaggaactac
aagctcaatgccgacgacaagcaggtgagcctgaggctggatgtgcctgtcgaactgccg
gagatccttggcaactgggatctgctgcttcaggtgctcgacaacctggtgggcaacgcc
ctgaagttcagccgccagggaggtgtgctgatgctgcgcgcctacacctggcccgacagc
tgttggatgccagcagcacggcaagaggagagcgctccccattgcgacctgatctcaccc
ctgcccagggtgcgcatcgaagtggccgataccggcttcggcatcagcgaagcggatcaa
caacgcattttcgatcgtttctatcgcgtcgagaatgccgtgcacaccgaggtaggaacg
ggcctggggctctccatcgtgcgaggcatcgtcgaaaagcatggcagcacaatccacatg
gccagcgaaccagaggttggcaccaccttctggttcgatctggccctggcccaatcggat
caggatgaactgcagcttcagtcggaccgacgcaaacggcaagaactggaactgttggaa
caggagctgagcggttga
DBGET
integrated database retrieval system
