Synechococcus sp. WH 8101: SynWH8101_2725
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Entry
SynWH8101_2725 CDS
T10836
Name
(GenBank) DEAD/DEAH box helicase
Organism
synu Synechococcus sp. WH 8101
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
DEAD
ResIII
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QBE70291
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Position
2495968..2499165
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AA seq
1065 aa
AA seq
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MSLLHATWLPAIRTPTSSGRPALLVWADTWRVAEPAGPGVTPATHPFTLSADDLRAWLSE
RDLLPDGIIDATACLTLPSRTVKPKRKRGETAPVDEGWTGLPLQAGEPIPKQTEWWPWQV
QGLAVEPGAATAWLARLPLSGRHPDLADELRWWSHMQRWALSLIARSRWIPQVELSKGEG
YPHRARWVPLLNREDDRRRLEDMAARLPLVATCALPWREPTGKRSNRTTRLRPEAMRAAN
PVACCRPRSGRLRVATLLEDLVDAQLRTGFTAQTEGLDPLLAAWEEALGSDTGVIHLGDE
DAERLATASHHWREGVAGTVAAARACLELETPDDGDDLWTLRFALQAEADPTLKVPAGLA
WAAGPKGLQLGEIAVEHPGELLLEGMGRALTVFPPIERGLDSATPEGMQLTPAEAFVLVR
TAARELRDVGVGVELPASLSGGLASRLGLAIQAELPEKSRGFTLGETLDWSWELMIGGVT
LTLRELERLAGKRSPLVRHKGAWIELRPNDLKNAERFFAAKPDLSLDDALRLTASEGDTL
MRMPVHRLEAGPRLQAVLEQYHQQKAPDPLPAPEGFCGQLRPYQERGLGWLAFLHRFDQG
ACLADDMGLGKTIQLLAFLQHLKAEQELKRPVLLVAPTSVLTNWKREAAAFTPELEVKEH
YGPRRPSTPAALKKSLKDVDLVLTSYGLLQRDSELLESLDWQGVVIDEAQAIKNPSAKQS
MAARDLARPGRSSRFRIALTGTPVENRVSELWALMDFLNPRVLGEEDFFRQRYRMPIERY
GDMSSLRDLKSRVGPFILRRLKTDKAIISDLPEKVELSEWVGLSKEQKALYAKTVEDTLD
AIARAPRGQRHGQVLGLLTKLKQICNHPALALKEEAAGDDFLQRSVKLQRLEEILEEVIE
AGDRALLFTQFAEWGHLLQGYLQRRWRSEVPFLSGSTSKSERQAMVDRFQEDPRGPQLFL
LSLKAGGVGLNLTRASHVFHIDRWWNPAVENQATDRAYRIGQTNRVMVHKFITSGSVEEK
IDRMIREKSRLAEDIIGSGEDWLGGLDMGQLKELVSLDDNGSLSA
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgctgcacgccacctggctcccggccatccgcacacccaccagttccgggcgt
cccgccctgctggtgtgggcggacacctggcgtgtggcggagccggcgggccccggcgtg
accccggccacccatcccttcaccctcagcgccgatgacctgcgcgcctggttgagcgaa
cgggacctgctgcccgacggcatcatcgatgccaccgcttgcctcaccctgcccagccgc
acggtgaagccgaaacggaagcgtggcgagaccgcccctgtggatgagggctggacgggt
ctacccctgcaggcgggggagccgattccgaagcaaaccgaatggtggccctggcaagtg
cagggcctggcggtcgaacccggtgcagccaccgcctggctggcccgcttgcccctctcc
ggccgacaccccgacctcgccgatgagctgcgctggtggagccacatgcagcgctgggcc
ctcagcctgattgctcgcagtcgctggattccccaggtggagctgagcaaaggggagggc
tacccccaccgcgcccgttgggtgcccctgctcaatcgcgaagacgatcgccgccgcctg
gaagacatggcggcccgactaccgctggtggccacctgcgctcttccctggcgcgaaccc
accgggaagcgcagcaaccgcaccacccggctgcggcctgaggcgatgcgggcggccaat
ccggtggcctgttgtcgcccccgcagcggtcgactgcgcgtcgccaccctgctcgaagac
ctggtggatgcccagctgcgcacgggcttcacggcccagacggaagggctcgatcccctg
cttgccgcctgggaagaggccctcggcagcgacaccggcgtgatccatctgggcgatgaa
gacgcagagcgtctggccaccgccagccatcactggcgcgaaggtgtggccggcactgtg
gcggcggcgcgagcctgcctcgaactggaaacccccgacgacggcgacgatctctggacc
ctgcggttcgcactgcaggccgaggcggatcccacactcaaggtgccggccggcctcgcc
tgggcggccggaccgaagggactccagctcggcgaaatcgccgtggagcatccgggcgaa
ctgctgctggaaggcatgggccgggcgctcaccgtatttccaccgatcgaacgcggtctc
gacagcgccacgcccgaggggatgcaactcacccccgccgaagccttcgtgctggtgcgc
accgcagcccgcgaactccgcgatgtgggggtgggcgtggagcttcccgccagcctctcg
gggggcctggcgagccggctcggcctggcgattcaggcggagctgccggagaaatcccgc
ggtttcacgctgggcgaaaccctcgactggagctgggagctgatgatcggcggcgtcacc
ctgacgctgcgggaactggagcgcctcgcgggcaagcgcagccccctggtgcggcacaaa
ggcgcctggatcgagctgcgccccaacgatctcaagaatgccgagcggtttttcgccgcc
aagcccgatctcagcctcgacgatgccctgcgcctcaccgccagcgaaggcgacacactg
atgcgcatgccggtgcaccgcctggaggcgggcccacggctgcaggcggtgctcgagcag
taccaccaacagaaagcccccgatcccctgccggcgccggaaggcttctgcggccagctg
cggccttaccaggagcggggcctcggctggctggcctttctgcaccgctttgatcagggc
gcttgcctggccgacgacatgggtctgggcaaaaccattcagctgctcgcctttctgcag
cacctgaaggccgagcaggagctgaagcggccggtgttgctcgtggcgcccacctcagtg
ctcaccaactggaagcgggaggccgccgccttcacgccggagctcgaggtgaaggagcac
tacgggccacgacgcccttccaccccggcagcgctcaaaaagagcctcaaggatgtggat
ctggtgctcaccagctacggcctgctccaacgcgacagcgaactgctggagagtctcgat
tggcagggggtggtgatcgacgaagcgcaggcgatcaagaacccgagcgccaaacagagc
atggcggcccgggacctggcccgtccaggacgtagcagccgcttccgcattgccctcacc
ggcacgccggtggagaaccgggtgagtgagctctgggccttgatggatttcctcaacccg
cgtgtgctcggcgaagaggacttcttccggcagcgctaccgcatgccgattgagcgctac
ggcgacatgtcgtcgctgcgggatctgaaatcccgcgtgggacctttcattcttcgccgg
ctcaaaaccgacaaagcgatcatttccgacctgcccgaaaaggtcgaactgagcgaatgg
gtgggattgagcaaagagcaaaaagcgctgtatgccaaaaccgtcgaagacacccttgat
gcgatcgcgcgggcgccccgcggacaacggcatggccaggtgctggggttgctcaccaag
ctcaagcagatctgcaaccaccccgccctggccctaaaagaggaggctgccggcgacgac
ttcctgcagcgttccgtgaaactgcagcgcctggaagaaatcctcgaggaagtgatcgaa
gccggcgaccgcgccctgctcttcacccagttcgctgaatggggccatctgctgcagggt
tacctgcaacggcgctggcgcagcgaagtgccgtttctgagcggcagcaccagcaagagc
gaacgccaggcgatggtcgatcgcttccaagaggacccgcgtgggcctcagctgttcctg
ctgtcactgaaagccggtggcgtgggcctcaacctcacccgcgccagccatgtgtttcac
atcgatcgctggtggaatccggcggtggaaaaccaggccaccgaccgcgcctaccggatc
ggccagacgaaccgggtgatggtgcacaagttcatcaccagtggatcggtcgaagaaaaa
atcgaccggatgatccgggagaaatcacgcctcgccgaagacatcatcggctcaggcgaa
gattggctcggcgggctcgacatgggccagctgaaggaactggtgagcctcgacgacaac
ggatcactatcagcatga
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