Synechococcus sp. WH 8103: SynWH8103_00004
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Entry
SynWH8103_00004 CDS
T04859
Name
(GenBank) DNA gyrase/topoisomerase IV, subunit A family protein
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
synw
Synechococcus sp. WH 8103
Brite
KEGG Orthology (KO) [BR:
synw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
synw03032
]
SynWH8103_00004
03400 DNA repair and recombination proteins [BR:
synw03400
]
SynWH8103_00004
Enzymes [BR:
synw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SynWH8103_00004
DNA replication proteins [BR:
synw03032
]
Prokaryotic type
DNA Topoisomerases
SynWH8103_00004
DNA repair and recombination proteins [BR:
synw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SynWH8103_00004
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
TR61B_FKBP-like
Motif
Other DBs
NCBI-ProteinID:
CRY90763
LinkDB
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Position
complement(5899..8373)
Genome browser
AA seq
824 aa
AA seq
DB search
MAEERVESIALHQEMQRSYLEYAMSVIVGRALPDARDGLKPVQRRILYAMQELGLTPDRP
YRKCARVVGDVLGKYHPHGDQAVYDALVRLVQTFASRHPLLDGHGNFGSVDDDPPAAMRY
TETRLAPIAHQALLEEIGDDTVDFAPNFDGSQQEPTVLPAQLPFLLLNGCSGIAVGMATS
IPPHNLGEVVDGLVALIRQPELSDSKLLELIPGPDFPTGGEVLLSSGLRDTYLVGRGSIP
MRGIAHIEEVQPGKGRHKRNAVVVTELPYQLSKAGWIEKLAESVNDGKIGGIADIRDESD
REGMRVVVELRRDADPAKVLADLQRRTALQSNFGAILLALVDGQPRQLSLRQLLQTFLDY
RELTLIRRTSHALRKTEDRLEVVDGLITALNNLQAVITMIQEARDAASARASLMVRLDLS
ERQADAVLAMPLRRLTGLEQESLRQELEELQAERERLRLLLDNRDQLLDAMVQELKGLKK
RFSTPRRTRLVEGGDALMAERAASQRPNTELLRQQALEALPADARLLIQADGQVKVMSPP
VLGRMHLSEPCAVGDHPSPAQVILPIEPSPRLLGVSASGRVALVRWEFAGQQPGSLEKFL
PSGLDGDPLIAILELPVGDGTEFSLGLLSSDGRFKRLPLADVLDLSGRATSVVKLKEGLS
LCSAVICREHSDLVLVSSMGRLLRLPVNDSVLPKMGRLAQGSMTMRLLPGEELVGSLSID
VAETDPTLLLVSRKGQMTRIDLTPLRRCQRGDLGIMAVVLSADEDSVAGLCSGDSLAGIV
TDQKRHGRLDAGAVELTAPGQSWPNQLDLNSKERVFSVVALKTS
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atggctgaggagcgcgttgaatcgattgccctgcatcaggagatgcagcgttcctacctc
gaatacgccatgagtgtgatcgtgggcagggccttgcccgatgcccgcgacggcttgaaa
ccggtgcaacgccggattctctatgcgatgcaggaactggggctcaccccagaccggccg
taccgcaagtgcgcccgcgtcgtcggcgacgtcttgggcaaataccacccccacggcgat
caagcggtttatgacgccttggtccggcttgttcagaccttcgccagtcgacacccacta
ctggatggtcacggaaacttcggttctgtcgacgatgatccgccggcagccatgcgttac
accgaaacacgcctggcaccgattgctcaccaggcattgctggaggaaatcggcgacgac
accgttgatttcgcaccgaatttcgatgggtcccagcaggaacccaccgtgctgccggcg
caactgccctttctcctgctgaacggctgttcgggcattgccgtgggcatggccaccagc
atccctccccacaacctcggcgaagtggtggatggcctagtggccttgattcgtcaaccg
gaactcagcgacagcaaactgctggaactcattccaggacctgatttcccaacgggtggg
gaggtactgctgagcagtggcctccgcgacacctacctggtgggacggggcagcatcccg
atgcgtgggattgcccacatcgaagaagtgcaacccggcaagggtcgccacaaacgtaat
gccgttgtggtgacggaactcccctaccagctgagcaaagccggctggatcgaaaagctg
gcggaatcggtgaatgacggaaagatcggcggcatcgccgacatccgcgatgaaagcgac
cgcgaaggaatgcgggtggtggtggagctgcgacgcgatgccgatccagccaaggtgctg
gctgatctgcaacggcgcacggcgctgcagagcaacttcggtgccatccttctggccctt
gttgatggtcagccccgccagctctccctacgccagttgttgcagaccttcctggattac
agggaactaaccctgatccggcgcaccagccatgctttgcgcaaaacggaagaccgcctt
gaagtggtcgacggcctgatcaccgcgctgaacaaccttcaggcagtgatcacgatgatt
caagaagctcgcgatgctgcttcggcgcgagccagcctgatggtgcgcctcgatttgagt
gaacgccaggctgacgccgttctggccatgccactgcgacggttgactggtctggaacag
gaaagcctgcgtcaggaactcgaggagctgcaagcggaacgggaacgtttgcgcctgctg
ctggacaaccgggatcaactgctcgatgccatggtccaggagctgaagggactgaaaaag
cgcttcagcacgccgcgccggacgcgactggtggaaggtggcgatgctctgatggcagaa
cgggccgccagccagcgacccaacactgagctgctgcgtcagcaggccctggaggccttg
cctgccgatgcacgattgctcatccaagctgatgggcaggtgaaggtgatgagtcccccg
gtgctgggtcgcatgcacctgtccgaaccttgtgccgtgggtgaccacccctctccggca
caggtcatcctcccaatcgaaccatcacctcgactcctgggggtcagcgccagcgggcgc
gttgctttggtccgctgggaattcgccggacaacagcctggatccctggagaaatttcta
cccagcggtcttgacggtgacccattgatcgccatcttggaactccccgtgggtgatggc
acagagttcagccttgggctgctcagcagcgatggacgctttaagcgactccccctggcc
gacgttctggacctctccggccgagccaccagcgtggtgaagttgaaggaaggcttgagc
ctttgttcagccgtgatctgtcgcgagcacagcgatctggtcttggtcagcagtatgggg
cgtctgctgcggctgcccgtgaatgattccgtgctgcccaagatggggcgtctggcgcag
ggatcgatgaccatgcgtcttcttcccggagaagaactcgtggggagcctgtcgatcgac
gtagctgaaacagatccaaccctgctgctggtcagccgcaaaggtcagatgacgcggatc
gacctcactccactgcgtcgttgccaacggggagatctgggaatcatggcggttgtgctc
agtgccgatgaagactccgtggctggactttgttccggagattccctggccggaatagtg
accgatcagaaacgccatggaagactggacgccggtgcagttgaattaacagcaccaggc
cagtcctggcccaatcaacttgatctgaacagcaaagagcgggttttttcagtggtagct
ctgaaaaccagctga
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