Synechococcus sp. WH 8103: SynWH8103_00202
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Entry
SynWH8103_00202 CDS
T04859
Symbol
uvrD
Name
(GenBank) DNA-dependent ATPase I and helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
synw
Synechococcus sp. WH 8103
Pathway
synw03420
Nucleotide excision repair
synw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
synw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SynWH8103_00202 (uvrD)
03430 Mismatch repair
SynWH8103_00202 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
synw03400
]
SynWH8103_00202 (uvrD)
Enzymes [BR:
synw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SynWH8103_00202 (uvrD)
DNA repair and recombination proteins [BR:
synw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SynWH8103_00202 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
SynWH8103_00202 (uvrD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
DEAD
NPHP3_N
AAA_11
AAA_22
ResIII
AAA_16
Motif
Other DBs
NCBI-ProteinID:
CRY90952
LinkDB
All DBs
Position
187942..190335
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AA seq
797 aa
AA seq
DB search
MSFLAGLNDAQRRAVDHHEGPLLVVAGAGSGKTRALTHRIAHLIGEHGADPAQILAVTFT
NKASREMKERLEVLLAQKLAQSQYGQPWSTLPPVDQRQLRSRIYREVSKELWIGTFHALF
ARMLRYDIDKFKDAEGLSWTKQFSIYDEADAQSLVKEIVTQELQLDPKRFEPKKTRWAIS
NAKNQGWLPDQLEANAEGQRGKLTADVYRRYRRALAANNALDFDDLLLLPVQLLQQNEQV
RSYWHRRFAHVLVDEYQDTNRTQYDLIKLLVTDGKDPQTYNNWSGRSVFVVGDADQSIYS
FRAADFTILMGFQEDFGDQAPDDATRTMVKLEENYRSTATILAAANALIANNSERIDKVL
RPTRGDGELITLTRCDDEIAEAEAVVHRLRTMEAANPELSWGDMAVLYRTNAQSRSIEES
LVRWGIPYIVVGGLRFYDRREIKDLLAYLRLLVNPADTVSLLRVINVPKRGIGKTTIQRL
TDAANQLGIPLWDVVSDAEAVRSLGGRSARGLLQFCELLHDLRRQVQEVAPSELIQQVME
KSGYISELIAEGTDEAEERRRNLQELVNAALQYQEENEEGDLEGFLATAALSSDADSKDT
AADRVTLMTLHSSKGLEFPVVCLVGLEQGLFPSYRSLDDPASLEEERRLCYVGITRAKER
LFLSHASERRLWGGMREAAVPSVFLSELPEALVQGDLPQSGGAALRRERRLERLTRVDRD
RPSSAPANAVRRRQAGPAPGRSWSVGDRVTHASFGVGEITHTFGSGEKVSIAVKFAGMGP
KILDPRLAPIEPIAADG
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgagctttctggccggcctcaacgacgcccagcgcagggcggtggaccaccacgaaggg
cccctgctggtggtggccggtgccggcagcggcaagacccgcgccctcacccatcgcatc
gcccatctgatcggtgagcacggtgctgatcccgcccagatcctggcggtgaccttcacc
aacaaggcttcccgcgagatgaaggagcggctggaggtgctgctggctcagaagctggcc
cagagccagtacggccagccctggagcaccttgccgccggttgatcaacggcagctgcgc
tctcggatttaccgcgaggtcagcaaggagttgtggatcggcaccttccacgccctgttc
gcgcggatgctccgctacgacatcgacaagttcaaggacgctgaggggctgagctggacc
aagcagttctcgatctacgacgaggccgatgcccagagcctggtgaaggagatcgtcacc
caggaactgcagctggatcccaagcggttcgagccgaagaagacccgctgggccatcagc
aacgccaagaaccagggctggctgccggatcaactggaagccaatgctgaaggtcagcgg
ggcaagctcaccgccgatgtgtaccgccgctaccgtagggcgctggcggcgaacaatgcg
ctggattttgatgatctgctgttgctgccggtgcagctgcttcagcagaacgagcaggtg
cgtagctactggcaccgccgctttgcccatgtgttggtggatgagtatcaagacaccaac
cgcacccagtacgacctgatcaagctgctggtcaccgatggcaaagacccgcagacctac
aacaactggagtgggcgctcggtgttcgtggtgggagatgccgaccagagcatctacagc
ttccgcgccgccgacttcacgatcctgatgggttttcaggaggacttcggtgatcaggcg
ccagacgacgccacccgcacgatggtgaagttggaggagaactaccgctccaccgccacg
atcctcgcggcggccaatgccctgatcgccaacaacagcgagcggatcgacaaggtgctg
cgacccacccgcggcgacggggagttgatcaccctcacccgttgtgatgacgaaattgcc
gaggccgaggcggtggtgcatcggctgcggacgatggaggcggccaaccccgagctgagc
tggggagatatggccgtgctgtatcgcaccaatgcccagtctcgctcgatcgaggaatcg
ctggtgcgctggggtatcccctacatcgttgtagggggtctgcgcttctacgaccggcgg
gagatcaaggatctgctggcctatctgaggctgttggtgaatccggcggacaccgtcagc
ctgctgcgggtgatcaatgtgcccaaacggggcatcggcaagaccacgattcagcggctc
accgatgccgccaatcaactggggatcccgctctgggatgtggtgagtgatgccgaagcc
gtgcgatccctggggggacggtcggcccgtggtctgctgcagttctgcgagctgctccat
gacctgcggcgtcaggtgcaggaggtggctccgtccgagctgatccagcaggtgatggag
aaaagcggctacatcagcgaactgatcgcggaaggcaccgatgaagcggaggaacgccgc
cgcaacctgcaggaattggtcaatgccgctcttcagtaccaggaggagaacgaggagggg
gatctcgaaggcttcctggctacggcagcgttgtccagcgatgccgacagcaaggacacc
gcagcggatcgggtcaccctgatgactttgcacagcagcaagggcctggagttcccggtg
gtgtgtctggtgggtttggagcagggcctgttccccagctaccgctccctcgatgatccg
gcctccctggaggaggagcgtcgcctctgctatgtcggcatcactcgcgccaaggagcgc
ctgtttctctcccatgccagtgagcgtcggctctggggtggcatgcgcgaagccgccgtg
ccgtcggtatttctttcagagctgccggaggccctggtgcagggggatctcccccagagc
ggtggagcggccctgcgccgcgaacggcggctggagcggctcacccgtgtggatcgtgat
cgtcccagctcggcgccggccaatgcggtgcgccgccgccaggcgggtccggcccccggg
cgcagctggagcgttggtgatcgcgtcacccatgccagcttcggggtcggcgagatcact
cacaccttcggtagtggtgagaaggtgtcgatcgcggtgaagttcgctgggatgggcccg
aagatcctcgatccgcggttggcgccgatcgagccgattgctgccgatggctga
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