Synechococcus sp. WH 8103: SynWH8103_00375
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Entry
SynWH8103_00375 CDS
T04859
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
synw
Synechococcus sp. WH 8103
Brite
KEGG Orthology (KO) [BR:
synw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
synw03036
]
SynWH8103_00375 (smc)
Chromosome and associated proteins [BR:
synw03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
SynWH8103_00375 (smc)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_29
AAA_15
BLOC1_2
Motif
Other DBs
NCBI-ProteinID:
CRY91120
LinkDB
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Position
complement(342706..346317)
Genome browser
AA seq
1203 aa
AA seq
DB search
MVHINQVGLTQFKSFGGAMTIPLEQGFTVVTGPNGSGKSNILDGVLFCLGLATSRGMRAD
RLPDLINSAVLKAGKAAETTVCVRFDLSDWQPDAAEDGLEAPEEGPWIKPGQTEWTVSRK
LRVMPGGSYSSSYSADGVACNLQQLQTQLRRLRIDPEGSNVVMQGDVTRIVSMSNRDRRG
LIDELAGVALFDSRIEQTRRKLDDVQERQDRCRIIEQELLASRQRLEKDCAKARQYQQLR
ERLQLGRRQEMVLAFEAAGQALRDLASRQQALEAQEQRDAAAIASGKESLSKASAELQTL
QEQVKALGEDQLLAVQAELKGLETSARELERQAGRHQEEGQRLQGLRHDLANRRQDWLHQ
SRELEQDPHQNSLAAAEATCRGAEAAVEVSRRRLGDVAGRSGAWLEEQKRRSGRRQELQV
ALAPLLEEQQQLQERLRQDAERLTELQQEQQQDGNDEQAVQQRLEQLEQDWQALLQSLSS
GKQALQQTADSLAIQQRTRSRLEQEQTRLEREIARLESRRDALQETRGTGALRLLLEAGL
NGIHGPVAQLGEVEDCHRLALEVAAGARLGQVVVDDDRIAAQAIALLKSRRAGRLTFLPL
NKIRAPGGGNSGAAFARGPRAGGGENSDGLVGRAVDLVRFEPVYDQVFAYVFGDTLVFSD
LSSARQQLGRSRAVTIDGELLEKSGAMTGGSLSPRSGGLSFGRSSDQDEAEPLRRRLLEL
GETLAACRREESKLAQTLEQQKPQLRALEQRQAALVAERNAARRNHGPLLERSRQRAERL
SRLSQQQSGQQQRLAVIGQELTPLQEELHQLEAAERNCDGHDDAGAWQQLQQDLEAADGR
LDSARKERDALLQSQRERQLAIERLGDQRQTLEEEERRLQEAVQALAATHTSWREQQLQL
QQQRSSLQQQQSDLQERFGEQRRARDAAEAEVGRQRQALQQAEWNLERLKEEREGLIEEQ
RSGAVRLQEMEQALPDPHPEIPEELRLAGLEALQADLQTIQQRMEALEPVNMLALEELEA
LEQRLAELNERLEVLNSEREELLLRIETVATLRQEAFMEAFTAVDGHFREIFASLSDGDG
QLQLENPDDPLEGGLTLVAHPKGKAVRRLAAMSGGEKSLTALSFLFALQRFRPSPFYALD
EVDSFLDGVNVERLAALIATQAEQAQFMVVSHRRPMIAAAERTIGVTQARGAHTQVVGLP
DAA
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
ttggttcacatcaatcaggtcgggctgacgcagttcaagtcgttcggtggggcgatgacg
atccccctcgagcaggggttcaccgtggtgacgggaccgaatggctcgggcaagagcaac
attcttgatggcgtcctgttctgccttggcctggccaccagccgggggatgcgagcagac
cgcctgccggatctaatcaacagcgccgtgcttaaggcgggcaaggccgccgagacgacg
gtgtgcgtccgcttcgacctcagcgactggcagccggatgctgctgaagacggtctcgag
gcgccggaggagggtccctggatcaaaccggggcagaccgaatggaccgtgagccgcaag
ctgcgggtgatgcctggggggtcctacagctccagctacagcgccgatggggtggcctgc
aacctgcagcaactgcagacccagttgaggcggctacgcatcgaccccgaaggcagcaat
gtggtgatgcagggcgatgtgacccgcatcgtctcgatgagcaaccgcgaccgccgcggc
ctcatcgacgaactggccggtgttgccctgttcgacagccgcatcgagcagacccgccgc
aagctcgacgacgtgcaggagcggcaggaccgctgccggatcatcgaacaggaactgctg
gccagtcgccagcgcctggaaaaagactgcgccaaggctcgccagtaccagcaactgcgg
gaacggctgcagctgggccgccgtcaggagatggtgctggccttcgaagcggcaggccaa
gcactcagggatctggccagccgtcagcaggcccttgaagcccaggagcaacgggatgct
gcggcaatcgccagcggcaaggagagtctcagcaaggccagcgccgaactgcaaaccctg
caggagcaggtgaaagccctgggggaagatcagctgttggcggttcaggcggagctgaag
ggtctggagaccagcgctcgggagctggaacggcaggccggccgccatcaggaggaaggt
cagcggctgcaggggttgcgccatgacctggccaaccgccgccaggactggctgcaccag
tcccgcgagcttgagcaggatccccatcaaaattctctggctgctgccgaggccacctgt
cggggggcggaagcagcggtggaggtctccaggcggcgccttggtgatgtcgccggccgc
tccggtgcctggctggaggagcagaaacgacgcagcggccgtcgccaggagctgcaggtc
gccctggcaccgctgctggaggaacagcagcaactgcaggagcggctgcggcaggacgcg
gaacggctgacggaactgcagcaggagcaacagcaggacggcaacgacgagcaggcggtg
cagcagcgactggagcagctggagcaggactggcaggccctgctccagagcctctcgtcc
ggaaaacaggcgctgcagcagaccgcagactccctggcgatccaacagcgcacccgatcg
cgactggagcaggagcagacccggctggaacgggagatcgctcggttggaaagccgccgc
gacgcactgcaggagacccgcggcaccggcgccctgcgcctgctgctggaggccggtctc
aacggcattcatggcccggtggcgcaattgggggaggtggaggactgtcaccgactcgcc
cttgaagtggccgccggcgcccgtctcggtcaggtggtggtcgatgacgaccgcatcgcc
gcccaggccatcgcgttgctcaaaagccgccgcgccggccggctcaccttcctgcccctc
aataagatccgcgccccaggcggtggcaacagcggtgctgccttcgcccgggggccccgc
gccggcggaggcgagaacagcgatggcttggtgggccgcgccgtcgacctggtgcggttt
gagcccgtctacgaccaggtgtttgcctacgtcttcggtgacacgctggtgttcagcgat
ctcagcagtgcccgtcagcagctcggccgcagccgcgccgtcaccatcgatggtgagctg
ctggagaaaagtggcgccatgacgggcggcagcctgtccccccgcagcggtggactgagt
tttggccgcagcagcgatcaagacgaagcagagccattgcggaggcgcctgctggaactg
ggggaaaccctggccgcctgccgccgggaggaatcaaagctggcccagaccctggagcag
cagaaaccacaactgcgggcgctggaacaacgccaggccgccctggtggccgaacgcaat
gccgcccgccgcaaccatggccccctgctggaacgcagccggcagcgagctgaacgcctg
agccgcctgtcacagcagcagagcggtcagcagcaacggctggcggtgatcggacaggag
ctgacgccactacaggaggaactgcaccagctggaagccgctgaacgcaactgcgacggc
catgacgatgccggcgcctggcagcaactgcagcaggatctggaggcggctgatggccgc
ctggacagcgcccgcaaggaacgggacgcgctgctgcaatcccaacgcgaacggcagctg
gcgatcgaacgtctgggggaccagcgccagacccttgaggaggaggagcgccggctgcag
gaggctgttcaggccctggccgcaacccacaccagttggcgcgagcaacagctacagctg
caacaacagcgcagttccctgcagcaacaacagtcggatctgcaggaacggttcggcgag
cagcgccgcgccagggatgccgctgaagcggaggtgggccgccaacggcaggcgttgcag
caggccgaatggaacctggagcggctgaaggaggaacgcgagggactgatcgaggagcaa
cgcagtggcgccgtgaggctgcaggagatggagcaggccctgccggatccccaccctgag
attcccgaggagctacgacttgcagggctggaagccctgcaggccgacctgcagacgatt
cagcaacgcatggaggcgctggagccggtgaacatgctggcgctggaggaactggaggcc
ctcgagcaacggctggccgaactcaacgaacgactggaggtgctcaacagcgaacgggaa
gagctgctgctgcggatcgaaaccgtcgccaccctgcgccaggaggccttcatggaggcc
ttcaccgccgtggatggtcatttcagggagatttttgcctccctctccgatggcgacggc
caactgcaactggagaatcccgacgaccccctcgagggaggcctgaccctggtggcccat
cccaaggggaaagcggtgcggcggctggcggcaatgtctggaggggagaaatccctcacc
gccctcagcttcctgtttgcgctgcagcgcttccgcccctcccccttctatgccctggat
gaggtggacagctttcttgatggcgtgaacgtggaacgcctggccgcactgattgccacg
caggccgagcaggcccagttcatggtggtgagccaccgccgaccgatgattgcggcggcg
gaacggaccatcggtgtgacccaagcccgcggcgcccacacccaggtggtcggacttccc
gatgccgcctga
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