Synechococcus sp. WH 8103: SynWH8103_00593
Help
Entry
SynWH8103_00593 CDS
T04859
Symbol
groL1
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
synw
Synechococcus sp. WH 8103
Pathway
synw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
synw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SynWH8103_00593 (groL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
synw03019
]
SynWH8103_00593 (groL1)
03110 Chaperones and folding catalysts [BR:
synw03110
]
SynWH8103_00593 (groL1)
03029 Mitochondrial biogenesis [BR:
synw03029
]
SynWH8103_00593 (groL1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
synw04147
]
SynWH8103_00593 (groL1)
Enzymes [BR:
synw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SynWH8103_00593 (groL1)
Messenger RNA biogenesis [BR:
synw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SynWH8103_00593 (groL1)
Chaperones and folding catalysts [BR:
synw03110
]
Heat shock proteins
HSP60 / Chaperonin
SynWH8103_00593 (groL1)
Mitochondrial biogenesis [BR:
synw03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SynWH8103_00593 (groL1)
Exosome [BR:
synw04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SynWH8103_00593 (groL1)
Exosomal proteins of other body fluids (saliva and urine)
SynWH8103_00593 (groL1)
Exosomal proteins of breast cancer cells
SynWH8103_00593 (groL1)
Exosomal proteins of colorectal cancer cells
SynWH8103_00593 (groL1)
Exosomal proteins of bladder cancer cells
SynWH8103_00593 (groL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
EAD9
Motif
Other DBs
NCBI-ProteinID:
CRY91336
LinkDB
All DBs
Position
519084..520718
Genome browser
AA seq
544 aa
AA seq
DB search
MAKRIIYNENARRALEKGIDILAESVAVTLGPKGRNVVLEKKFGAPQIINDGVTIAKEIE
LEDHIENTGVALIRQAASKTNDAAGDGTTTATVLAHAMVKAGLRNVAAGANAITLKKGID
KASDFLVSKIKEQAKPIADSNAIAQVGTISAGNDEEVGKMIADAMDKVGKEGVISLEEGK
SMETELEVTEGMRFDKGYISPYFATDTERMEAVLDEPYILLTDKKIGLVQDLVPVLEQIA
RTGKPLMIIAEDIEKEALATLVVNRLRGVLNVAAVKAPGFGDRRKAMLEDMAVLTNGQLI
TEDAGLKLENAKLEMLGTARRVTINKDTTTIVAEGNEAAVGARCEQIKKQMDETDSTYDK
EKLQERLAKLAGGVAVVKVGAATETEMKDKKLRLEDAINATKAAVEEGIVPGGGTTLAHL
APSLEEWANGNLSGEELIGANIVAAALTAPLMRIAENAGANGAVVAENVKSRAISEGYNA
ATGDYVDMLAAGIVDPAKVTRSGLQNAASIAGMVLTTECIVADLPEKKDAAPAGGGMGGG
DFDY
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggctaagcgcatcatttacaacgagaacgcccgccgcgctctcgaaaaaggcatcgac
atcctggccgagtccgtggccgtgaccctgggaccaaagggccgcaacgtggtgctcgag
aaaaagttcggtgctcctcagatcattaatgacggtgtcaccatcgccaaggagatcgag
ctcgaggatcacatcgagaacaccggtgttgctctgatccgtcaggccgcctccaagacc
aacgacgctgccggtgacggcacaaccaccgccaccgtcctggcccacgccatggtcaag
gccggtctgcgcaacgtggccgccggtgccaacgccatcaccctgaagaaaggcatcgac
aaggcctccgacttcctggtcagcaagatcaaggagcaggccaagcccatcgccgacagc
aacgccatcgcccaggtgggcaccatctccgccggcaacgacgaagaagtcggcaagatg
atcgccgatgccatggacaaggttggcaaggaaggcgtgatttccctggaagagggcaag
tccatggagaccgaactagaggtcaccgagggcatgcgcttcgacaagggctacatctcc
ccgtatttcgccaccgacaccgagcggatggaagcggtgctcgacgagccctacatcctg
ctgaccgacaagaagatcggtctggtgcaggacctggtgcccgtgctcgagcagatcgcc
cgcaccggcaagcctctgatgatcatcgctgaggacatcgagaaggaagccctggccacc
ctggtggtgaaccgcctgcgcggtgtgctgaacgtggccgccgtcaaggctcctggcttc
ggtgaccgccgcaaggccatgctcgaagacatggctgtgctgaccaacggtcagctgatc
accgaggacgctggtctcaagctggagaacgccaagctggagatgttgggcaccgcccgt
cgcgtcaccatcaacaaggacaccaccaccatcgttgccgaaggcaatgaggcggctgtc
ggcgctcgctgcgagcagatcaagaagcagatggacgagaccgactccacctatgacaag
gagaagctgcaggagcgtctggccaagctggccggtggcgttgctgtggtgaaagtgggt
gcggccaccgaaaccgagatgaaggacaagaagcttcgtctcgaggacgccatcaacgcc
accaaggctgcggtggaagagggcatcgtccctggcggcggcaccaccctggcccacctg
gctccttcccttgaggagtgggccaacggcaacctgtccggtgaagagctgatcggcgcc
aacatcgtggctgctgccctgacggcaccgctgatgcgcatcgctgaaaacgctggtgcc
aacggcgctgttgtggctgagaacgtcaagtcccgcgccatcagcgagggctacaacgct
gccaccggcgattacgtcgacatgctggctgccggcatcgtcgatcccgccaaggtgact
cgctccggtctgcagaatgccgcctccatcgctggcatggtgctgaccaccgagtgcatc
gtggctgatctgcccgagaagaaggacgcagctcctgccggcggcggcatgggcggtggc
gacttcgactactga
DBGET
integrated database retrieval system
