Synechococcus sp. WH 8103: SynWH8103_00620
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Entry
SynWH8103_00620 CDS
T04859
Symbol
rnz
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
synw
Synechococcus sp. WH 8103
Brite
KEGG Orthology (KO) [BR:
synw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
synw03016
]
SynWH8103_00620 (rnz)
Enzymes [BR:
synw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
SynWH8103_00620 (rnz)
Transfer RNA biogenesis [BR:
synw03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
SynWH8103_00620 (rnz)
Prokaryotic type
SynWH8103_00620 (rnz)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
CRY91362
LinkDB
All DBs
Position
complement(538761..539720)
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AA seq
319 aa
AA seq
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MQVTFLGTSSGVPTRARNVSAVALRLPQRSEMWLFDCGEGTQHQFLRSDLRLSQLRRVFV
THMHGDHVFGLPGLLASLGLSGSCQDGVDLYGPDPLESFLKGALNTSSTRIGYPLQVHRS
RPAAEQGTLLFEDDELTVRCTPLTHRVPAYAYRVDQKPLAGRFDIDKARSLGIPPGPVYA
QLKRGESVTLEDGRVIDGTTLCGPERPGVSVMICTDTVFCDAAVELARGVDLLIHESTFA
HAEAEMAFQKQHSTSTMAAQTAAEAGVGQLAITHLSPRYVPGNPVSPDDLLKEAQAIFPN
TVLAKDFLSLDVKPCCNSS
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
gtgcaggtcacctttctcggtaccagttccggagttcccacgcgggcgcgcaacgtctcc
gccgtggcgctgcgtctgccccagcgatcggagatgtggctgttcgactgtggcgagggc
acccagcatcagtttctgcgcagcgatctgcgcctgtcgcagctgcggcgggtctttgtc
acccacatgcatggtgatcacgtcttcgggctgccgggattgctggccagcctgggattg
tccggctcctgccaggacggggtggatctctacggccctgacccgctcgagtcgtttctg
aagggtgcgctgaacaccagctccacccgcatcggctatccgcttcaggtgcaccgctca
cggccggcggctgagcagggaacgctgctgttcgaagacgacgagctcaccgtgcgctgc
acccccctgacccaccgggtgcccgcttacgcctaccgggtggaccaaaagcccctggcg
ggtaggttcgacatcgacaaagcccggtccctcggcattccgccagggccggtgtatgca
cagctgaagcggggggagagcgtcaccctggaggacggccgcgtgatcgacggcaccacc
ctctgcggcccggagcgaccgggggtgagcgtgatgatctgcaccgacaccgtgttctgc
gacgccgccgttgagctggcccgaggcgtggatctgctcatccatgaatcgaccttcgcc
cacgctgaggcggagatggccttccagaaacagcactccaccagcaccatggcggcccag
accgcagctgaagccggggtgggacagctggcgatcacccatctcagtccccgttatgtg
ccgggcaacccggtcagccccgacgacctgttgaaggaagcgcaggcgatcttccccaac
acggtcctggccaaggacttcctcagcctggatgtgaaaccctgctgcaacagttcgtga
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