Synechococcus sp. WH 8103: SynWH8103_01095
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Entry
SynWH8103_01095 CDS
T04859
Name
(GenBank) ABC multidrug efflux transporter
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
synw
Synechococcus sp. WH 8103
Pathway
synw02010
ABC transporters
synw03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
synw00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SynWH8103_01095
03070 Bacterial secretion system
SynWH8103_01095
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
synw02000
]
SynWH8103_01095
02044 Secretion system [BR:
synw02044
]
SynWH8103_01095
Transporters [BR:
synw02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
SynWH8103_01095
Secretion system [BR:
synw02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
SynWH8103_01095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
cNMP_binding
AAA_22
Peptidase_C39
AAA_30
ABC_ATPase
AAA_29
nSTAND3
AAA_16
RsgA_GTPase
DUF87
PRK
KAP_NTPase
AAA_18
ORC-CDC6-like
SDF
Motif
Other DBs
NCBI-ProteinID:
CRY91829
LinkDB
All DBs
Position
complement(970377..973400)
Genome browser
AA seq
1007 aa
AA seq
DB search
MQLRQALRLINSWAPFSKLSTEQKAKLAETIQPLRLRPGQKLYDFSDLPPGIALIAEGQM
RLLALDEREEPFTLYRLAPGDQAGHIGILRGVTGYALAASQPSLLWLLPQTGFLQVIAEN
AEFANEFLEPNIEELYGVSILTNSPLNNTKNEIKDWASNKIAESKGDHKILLLPPGEHFV
DSKWGPWLVSSSNISGCKPGEELLGPMKLIVQGKVPARLISKSGATPPINVPQVLVVSPD
SSEAAPLQIEAEVVEPDWQESSTAIVAVEKQQEALEDWYGKLGDDGSFPQLDGSGPVGIP
MAALRMLARYFDIPFRKDVIQRIIEDQLMRNELSETGERSIGLIQLAATADLIGLRATQI
NVTENQIGRLQLPAIAIRKNKPIILWSADMVGQALISCPEEGQIKVSTKDLGARNDDGTI
QVLTIQRSKVSPKKRFGLGWFIPALKEHKAVLIQVLVASFFVQLFGLLNPLLIQQIIDAV
ISQGNVSSLNVLGTLLIGMSLAQAVLSSLRTYLFADTTNRIDISLGSSIIDHLLRLPLGY
FSDRPVGEVSSRINELQKIRQFLTGTALTVVLDAIFAIIYIAVMLLYSVQLTVWSLVVVP
LFVGLTLVSAPIIRKQLREQAEANARVQSHLVETVGGMETIKGQSMEIHSRWRWQQLYGG
QITSGFRNTVTSTAAGSASQFLEQLSGLIVLWIGASLVLKGELTLGQLIAFRILASYVTS
PLLRMANLWQNFQETALSLERLADIVDHPQELEITGEQKPPIPPIVGTVEYKGVNFRFGK
EGALNLSNINFKIEQGSFIGVVGSSGSGKSTMLKMLTRLYEINDGQILIDDNDISKVDLY
SLRSQIGVVPQDSLLFDGSVMSNIALARPDASFEEVVLAAQIACAHEFIQAMPAGYNSSV
GERGAGMSGGQRQRMAIARMIIRRPRLLVLDEATSALDVDTERRLTANLIELYKDSTVFF
ITHRLASLKFADVILVMDQGALVEKGTHEELMALDGRYATLYHQQES
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgcaattaagacaggcattgcgcctaatcaactcctgggcgcctttctcaaaactatca
acagagcaaaaggcaaaactagcagaaacaattcaaccattacgattacgtccgggtcaa
aaattatatgatttttcagaccttcctccagggatagccctcatagcagagggtcagatg
agattgcttgcattagatgaaagagaagaacctttcacactatatagattagctccagga
gatcaagctggacatattggaatcctcaggggggtaactggttatgcattagccgcatcg
cagccaagcttgctatggctgcttcctcaaactggatttctgcaagtaatagcggaaaac
gcagaatttgcaaatgaatttcttgaacctaacattgaagaattgtatggagttagtata
ttaacaaattcgcctctaaataacacgaaaaacgagataaaagactgggcaagcaacaaa
atagcagaatcaaaaggagatcacaaaatattactactacctccaggtgaacactttgtt
gattctaaatgggggccgtggttggtaagcagttcaaacatttctgggtgcaagccaggt
gaagaattacttggaccaatgaagttaatagttcaagggaaagttcctgcaagattaatc
tctaaaagtggagctacacctccaatcaatgtcccacaagtattagtcgtaagcccagac
tctagcgaggctgcacctctccaaattgaggctgaagtcgtagaacctgactggcaagaa
agcagcacagcaatagttgcagtagaaaaacagcaggaggctcttgaagattggtatgga
aagcttggcgatgacgggagctttccacagttggatgggtctggacctgtagggattcca
atggctgcattaagaatgcttgcgagatactttgatataccttttagaaaagatgtaata
cagagaataattgaagatcaattgatgagaaatgaattatcagaaacgggagaaagatca
attggtttgattcaacttgctgctactgctgacttaattggccttagagcaacacaaata
aatgtaacggaaaaccagatagggcgtttacaattacctgcaatagcaatacgtaagaat
aaaccaataatattatggtcagcggacatggttggccaagcactgatcagttgccccgaa
gaaggacaaataaaagtttcaacaaaagacttaggtgctagaaacgatgatggaacaata
caggttttaacgattcaaagaagcaaagtatcacctaagaaacgatttgggttgggatgg
tttataccagctttaaaagaacataaagcagtccttattcaggttctagtcgccagtttt
tttgtacaactatttggattattaaatccacttttgatacaacaaataatagatgctgtg
atcagccaaggaaatgttagcagccttaatgtgcttggaacattgttaataggcatgagt
ctagctcaagcagtattatcttcgctaaggacatacctatttgcagatactacaaatcga
atcgatatctcattaggttcatcaatcatcgatcacctacttaggcttccattaggttac
ttttcagatcgaccagtcggcgaagtaagcagcagaatcaatgaactacaaaaaataaga
cagtttttgaccggtacagcgctaacggtagtgttagatgcaatttttgcaatcatctac
attgctgttatgttactttactcagtccaattaacagtatggtcattagtagtagttcca
ttatttgtggggttgacattagtatcagcaccaatcatacgaaagcaacttagagaacag
gctgaagctaacgctcgggtacaaagtcacttagttgagaccgttggaggaatggaaacc
attaagggccagagtatggaaattcatagtcggtggcgatggcaacagctctacggaggt
cagataacatcgggttttaggaacaccgtaacaagcacagcggccggatcagcaagtcag
tttcttgaacagctttcaggacttattgttttgtggattggagcctcactggtattaaaa
ggtgaactaacacttggacaattaattgccttcagaatcttagcaagttacgtgacaagt
cctttgcttaggatggcaaacttatggcaaaattttcaagaaactgcattatcattagag
agactggctgatatcgtagatcatccacaagaattagaaattactggagaacaaaagcca
ccaattcctcccatagtaggaacagtggaatataaaggtgttaactttagatttgggaag
gaaggagcacttaatctatcaaacattaatttcaaaattgaacaaggttcattcattggg
gtcgtgggaagtagtggctctggcaaaagcacaatgttgaaaatgctaacaaggctatac
gaaataaacgatggccaaattctcatagacgataatgacattagcaaagttgatctctac
tccttaagatcgcaaatcggtgtagtaccacaagatagtctgttgttcgatgggtcagta
atgtcaaatattgcgttagcaaggcctgatgcatcatttgaggaagttgtactagcagca
caaattgcctgtgcacacgaatttattcaagctatgcccgccggctacaacagctccgta
ggggaaagaggagctggaatgagtgggggacaaagacaaagaatggcaatagcaagaatg
ataatcaggagaccaagattactagtactagatgaagcaacaagtgctcttgatgtagac
actgaaagaagattaacggcaaatctgatagaattgtataaggatagcaccgttttcttt
ataactcatagattggcatctctcaaatttgctgatgttattcttgtaatggatcaaggg
gcattagttgaaaaaggtactcatgaagaacttatggcattggatggccgctatgcaaca
ctttaccaccaacaagaatcctaa
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